CN181548

Overview
NameCN181548
Unique NameCN181548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ G +    T I    DPDG+K   +  +
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKK 127          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ G +    T I    DPDG+K   +  +
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKK 127          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22
Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = -3
Query:  277 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 654
            L   M+RVGDL +S++FY   LGM LLR  D P  ++TLA +GY +E +  V+ELT+N+G  +Y  GN +  +A+  +D+Y + + +    ++ GGK+ R+PG +    T I    DPDG+K  L+
Sbjct:    3 LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKI----RDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIELI 124          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGV------TEYTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            L Q M R+ D   S++FY K LGM LL+ +D PE K++L  +GY +                 Q + LELT+N+G       T Y  GN+    +  + ++ DDVYK+ E      + LG +  ++P  + G    I    DPDG+   + D +
Sbjct:   28 LQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERF----ESLGVEFVKKP--LDGKMKGIAFIKDPDGYWIEIFDTK 175          
The following BLAST results are available for this feature:
BLAST of CN181548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
LGUL_NEIMB1.938e-2342.64Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA1.938e-2342.64Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_SYNY31.256e-2239.68Probable lactoylglutathione lyase OS=Synechocystis... [more]
LGUL_SOLLC2.223e-1131.17Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181548 ID=CN181548; Name=CN181548; organism=Citrus sinensis; type=EST; length=701bp
TTTTTTTTTTTTTTTTTAGAAAAAAAACAAATGCTGCCATACCCATTTAA
TCCAAATTTAAGCAGTAGATCTCAATTTAATAATTCATCACATCACATAG
CAGCAAACCACCGATATCGTAACAGGCATATCGGTGGCTTTCAATACCAG
ACACGGTAATTTATTCATACAGATAGTACAGTAGTAGGATTTATTTTGAT
GCAAGTGTTTTGCAAAACTCCTCCTACCATGACATCATTATTCCGACTGA
ATTTCCTTCAGAAAATCTTCATTGTCAACCAGGACCGTTTTCCAGCCATC
TGGGTCTACGAAAGAGGTGATTTTGGTGTTGAGTCCAGGGATTGATCCGG
GTTGCCGAGTTATCTTCCCTCCAAGCTCTTGGGTAACCAGGTTGACAACC
TCAGCACTTTTGTATACATCATCAGTACTAATAGCAACCTGCGCATATGC
ATTTCCCTTGGTATATTCAGTCACACCATAATTATAAGTTAACTCCAGAA
CAGTAGTCTGATCTTCCTCAGCATATCCAAGCATGGCCAGGGTGTACTTG
TATTCAGGTTTATCAACTGTTCTTAACAGTTTCATCCCCAAAGCCTTTTC
ATAGAACTTGATGGAGCGACCAAGATCGCCAACGCGAAGCATTACTTGAC
AGAGTGGTTCAGGAGTTGGACCTCTCTGGATGAGTTCAAAAATATAACCA
T
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