CN181546

Overview
NameCN181546
Unique NameCN181546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:17..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.165e-36
Identity = 72/132 (54.55%), Postives = 92/132 (69.70%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 486
            + LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GP+KGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 82.4185 bits (202), Expect = 2.347e-15
Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  484 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV 666
            +   MLRVGDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGV 63          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.239e-32
Identity = 61/125 (48.80%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR 465
            R LH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 70.4774 bits (171), Expect = 9.229e-12
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  484 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY 660
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNW 61          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.239e-32
Identity = 61/125 (48.80%), Postives = 88/125 (70.40%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR 465
            R LH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          

HSP 2 Score: 70.4774 bits (171), Expect = 9.229e-12
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  484 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY 660
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE ++TLA +GY +E  +TVLELT+N+
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNW 61          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.467e-25
Identity = 81/226 (35.84%), Postives = 110/226 (48.67%), Query Frame = 1
Query:  100 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVVELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYA--EEDQT----TVLELTYNYG 663
            H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V+ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R+ +  RS++FY+  LGMKLLRT +    K+TL  LGY   + D      +VLELT+N+G
Sbjct:   25 HTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWG 248          

HSP 2 Score: 75.485 bits (184), Expect = 2.869e-13
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVVELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 468
            +F H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V+ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  182 KFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.898e-23
Identity = 78/220 (35.45%), Postives = 112/220 (50.91%), Query Frame = 1
Query:  100 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYG 663
            H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D   SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G
Sbjct:   14 HTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG 229          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21
Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 1
Query:   88 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE 624
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  R   PL      +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ ++    A+LGYA++
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYADD 180          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20
Identity = 61/190 (32.11%), Postives = 93/190 (48.95%), Query Frame = 1
Query:   88 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 621
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  +   PL      I   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ +     A+LGYA+
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYAD 179          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19
Identity = 60/188 (31.91%), Postives = 97/188 (51.60%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 621
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV+ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L VGDL +S K++ + LGM ++      E K T   L + E
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGE 172          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.962e-18
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 1
Query:   91 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 564
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV+E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V + VGDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17
Identity = 65/205 (31.71%), Postives = 91/205 (44.39%), Query Frame = 1
Query:   88 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 621
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+               N  +   PL      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +K E K   A+LGYA+
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYAD 194          
The following BLAST results are available for this feature:
BLAST of CN181546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_HAEIN9.165e-3654.55Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB1.239e-3248.80Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA1.239e-3248.80Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST1.467e-2535.84Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
LGUL_SCHPO8.898e-2335.45Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_RAT1.678e-2132.46Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
GLOD4_MOUSE9.208e-2032.11Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEBR7.795e-1931.91Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL2.962e-1831.36Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN9.529e-1731.71Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181546 ID=CN181546; Name=CN181546; organism=Citrus sinensis; type=EST; length=674bp
GAGGCTGAGTGATTCCATATCAAAATGGCTGAGGCTTCTCCTGCTGCTGC
TAATGCCGAGTTGCTGGAATGGCCAAAGAAAGATAAGCGACGCTTCCTTC
ATGCTGTGTATCGTGTTGGTGATCTTGATCGCACCATCAAATTTTACACC
GAATGCTTTGGGATGAAGCTGTTGAGAAAGAGAGACGTCCCGGAAGAGAA
ATACTCAAATGCCTTTCTTGGATTTGGCCCCGAACAGTCTCACTTTGTTG
TGGAGTTAACGTACAACTATGGTGTAACTTCATATGATATTGGAACTGGT
TTTGGCCATTTTGCAATTGCAACTGAAGATGTTTACAAACTGGTTGAAAA
CATTCGTGCCAAGGGTGGCAATGTCACTAGAGAGCCTGGTCCACTTAAAG
GTGGAACAACTCACATTGCCTTTGTGAAGGATCCCGATGGTTATATTTTT
GAACTCATCCAGAGAGGTCCAACTCCTGAACCACTCTGTCAAGTAATGCT
TCGCGTTGGCGATCTTGGTCGCTCCATCAAGTTCTATGAAAAGGCTTTGG
GGATGAAACTGTTAAGAACAGTTGATAAACCTGAATACAAGTACACCCTG
GCCATGCTTGGATATGCTGAGGAAGATCAGACTACTGTTCTGGAGTTAAC
TTATAATTATGGTGTGACTGAATA
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