CN181546

Overview
NameCN181546
Unique NameCN181546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:17..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13
Identity = 47/142 (33.10%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  106 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYGV------TSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 456
            ++R+ D   +++FY++  GM LL++ D PE K+S  F+G+    S                  +ELT+N+G       T Y  G     GFGH  +  +DVYK  E   + G    ++  PL G    IAF+KDPDGY  E+
Sbjct:   32 MFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKK--PLDGKMKGIAFIKDPDGYWIEI 171          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 1
Query:  106 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-----GPEQ----------SHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELIQR 465
            ++R+ D   ++ FY+   GM LL++ D PE K+S  F+G+      P                +ELT+N+G  S      Y  G     GFGH  I  +D YK  E  +  G    ++P  G +KG    IAF+KDPDGY  EL  R
Sbjct:   33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKG----IAFIKDPDGYWIELFDR 175          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 48/147 (32.65%), Postives = 70/147 (47.62%), Query Frame = 1
Query:  106 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-----GPE----------QSHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELIQR 465
            ++R+ D   ++ FY+   GM LL++ D PE K+S  F+G+      P                +ELT+N+G  S      Y  G     GFGH  +  +D YK  E  +  G    ++P  G +KG    IAF+KDPDGY  E+  R
Sbjct:   32 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKG----IAFIKDPDGYWIEIFDR 174          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_PSEPU (Lactoylglutathione lyase OS=Pseudomonas putida GN=gloA PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 53/152 (34.87%), Postives = 72/152 (47.37%), Query Frame = 1
Query:   94 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQSH-------FVVELTYNYGVT-----SYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP 477
            F H + RV D+++++ FYT   G KL+ KRD  E K+S  FL            +  H        V+ELT+N+G       +Y  G     GFGH  ++  DV    E   A    V  +     G   H+AF+KDPDGY  E+IQ  PTP
Sbjct:   25 FNHTMLRVKDIEKSLDFYTRVLGFKLVDKRDFVEAKFSLYFLALVDPATIPADDDARHQWMKSIPGVLELTHNHGTERDADFAYHHGNTDPRGFGHICVSVPDVVAACERFEAL--QVPFQKRLSDGRMNHLAFIKDPDGYWVEVIQ--PTP 172          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_PSEAE (Lactoylglutathione lyase OS=Pseudomonas aeruginosa GN=gloA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12
Identity = 48/149 (32.21%), Postives = 68/149 (45.64%), Query Frame = 1
Query:   94 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLG------------------FGPEQSHFVVELTYNYGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ 462
            F H + RV D  R++ FY+   GM+LLR+ D  E ++S  FL                   FG +    V+ELT+N+G  S D           GFGH   +  D+    E     G N  +   PL  G  ++AF+ DPDGY  E++Q
Sbjct:   24 FNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQS---VLELTHNWGSESDDSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVK---PLDRGMKNVAFISDPDGYWVEIVQ 166          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11
Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = 1
Query:  106 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY---IFELIQRGPT 474
            ++RV D   ++ FY+   GM LL++ D  E K+S  FLG+    +                  +ELT+N+G  S      Y  G     GFGH  +  +DV+K  E     G    ++P    G   +IAF+KDPDGY   IF+L   G T
Sbjct:   32 MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPH--DGKMKNIAFIKDPDGYWIEIFDLKTIGTT 180          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11
Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 1
Query:  106 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQ-------SHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY---IFELIQRGPT 474
            ++R+ D   ++ FY+   GM LL++ D  E K+S  FLG+         P +           +ELT+N+G  S      Y  G     GFGH  +  +DV+K  E     G    ++P    G   +IAF+KDPDGY   IF+L   G T
Sbjct:   32 MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPN--DGKMKNIAFIKDPDGYWIEIFDLKTIGTT 180          
BLAST of CN181546 vs. ExPASy Swiss-Prot
Match: LGUL_RAT (Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 49/157 (31.21%), Postives = 72/157 (45.86%), Query Frame = 1
Query:   73 PKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELI 459
            P    + FL    + R+ D  +++ FYT   G+ LL+K D P  K+S  FL +  +                    +ELT+N+G       SY  G     GFGH  IA  DVY+  +     G    ++P  G +KG    +AFV+DPDGY  E++
Sbjct:   23 PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKG----LAFVQDPDGYWIEIL 175          
The following BLAST results are available for this feature:
BLAST of CN181546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_SOLLC2.197e-1333.10Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
LGUL_CICAR6.391e-1334.01Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_SOYBN1.424e-1232.65Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_PSEPU1.424e-1234.87Lactoylglutathione lyase OS=Pseudomonas putida GN=... [more]
LGUL_PSEAE9.229e-1232.21Lactoylglutathione lyase OS=Pseudomonas aeruginosa... [more]
LGUL_BRAJU2.685e-1132.45Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH2.685e-1132.45Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_RAT5.982e-1131.21Lactoylglutathione lyase OS=Rattus norvegicus GN=G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181546 ID=CN181546; Name=CN181546; organism=Citrus sinensis; type=EST; length=674bp
GAGGCTGAGTGATTCCATATCAAAATGGCTGAGGCTTCTCCTGCTGCTGC
TAATGCCGAGTTGCTGGAATGGCCAAAGAAAGATAAGCGACGCTTCCTTC
ATGCTGTGTATCGTGTTGGTGATCTTGATCGCACCATCAAATTTTACACC
GAATGCTTTGGGATGAAGCTGTTGAGAAAGAGAGACGTCCCGGAAGAGAA
ATACTCAAATGCCTTTCTTGGATTTGGCCCCGAACAGTCTCACTTTGTTG
TGGAGTTAACGTACAACTATGGTGTAACTTCATATGATATTGGAACTGGT
TTTGGCCATTTTGCAATTGCAACTGAAGATGTTTACAAACTGGTTGAAAA
CATTCGTGCCAAGGGTGGCAATGTCACTAGAGAGCCTGGTCCACTTAAAG
GTGGAACAACTCACATTGCCTTTGTGAAGGATCCCGATGGTTATATTTTT
GAACTCATCCAGAGAGGTCCAACTCCTGAACCACTCTGTCAAGTAATGCT
TCGCGTTGGCGATCTTGGTCGCTCCATCAAGTTCTATGAAAAGGCTTTGG
GGATGAAACTGTTAAGAACAGTTGATAAACCTGAATACAAGTACACCCTG
GCCATGCTTGGATATGCTGAGGAAGATCAGACTACTGTTCTGGAGTTAAC
TTATAATTATGGTGTGACTGAATA
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