CN181537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = -3 Query: 366 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 695 + KR+ KE K + +PP SA P E++ W I GPP +P+ G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = -3 Query: 297 DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKY 575 DS YAG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 77 DSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12 Identity = 45/136 (33.09%), Postives = 64/136 (47.06%), Query Frame = -3 Query: 264 PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRNKYETTARSWTQKY 650 P TSC H + P + Y GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + +D L + A M+ +R + R + +Y Sbjct: 53 PSTSC---------LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = -3 Query: 381 SKRILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 692 +KRI KEL + P + S D+ + I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDII--KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 8.812e-12 Identity = 34/126 (26.98%), Postives = 65/126 (51.59%), Query Frame = -3 Query: 354 SAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 722 +++ + T A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 4 TSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.151e-11 Identity = 34/126 (26.98%), Postives = 64/126 (50.79%), Query Frame = -3 Query: 354 SAASQVETMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 722 ++ + T A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 4 NSVKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
BLAST of CN181537 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11 Identity = 34/119 (28.57%), Postives = 61/119 (51.26%), Query Frame = -3 Query: 354 TMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 701 T A++R+ ++ ++KDP A P+ ++ W + GP +PY GG + + FP ++PFKPP + T + N +CL D + W+PA ++S +L + S + + P Sbjct: 11 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127 The following BLAST results are available for this feature:
BLAST of CN181537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181537 ID=CN181537; Name=CN181537; organism=Citrus sinensis; type=EST; length=763bpback to top |