CN181522

Overview
NameCN181522
Unique NameCN181522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.593e-65
Identity = 115/165 (69.70%), Postives = 132/165 (80.00%), Query Frame = 2
Query:  128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            W  AHATFYGG+DASGTMGGACGYG+LYSQGYG   AALSTALFN+G SCG C++I C  +  P WC  G  ++ +TATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI  YRAGI+PV Y+RVPC KKGG+RFTING  YFNLVLVTNVA  G I  ++V
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGV-TVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDV 215          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.081e-65
Identity = 113/165 (68.48%), Postives = 131/165 (79.39%), Query Frame = 2
Query:  128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG   AALSTALFN+G SCG C++I C  +  P WC  G  ++ +TATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI  Y AGI+PV Y+RVPC KKGG+RFTING  YFNLVLVTNVA  G I  +++
Sbjct:   34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGV-TVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 197          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 2.717e-65
Identity = 117/194 (60.31%), Postives = 142/194 (73.20%), Query Frame = 2
Query:   50 AGVILSLVCLMWVADARLPGDYSG---GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            A ++ ++VC +  A A   G         W  AHATFYGG+DASGTMGGACGYGNLY+QGYG  TAALSTALFN+GL+CG C+++ C    +  WC  G  S+ +TATNFCPPN+ LPSD+GGWCNPPRPHFD+A P + KI  YR GI+PV Y+RVPC KKGG+RFTING  YF LVL+TNV  AG I  ++V
Sbjct:    5 ARMLAAVVCAIMPAAAMAAGGVGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGV-SVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDV 197          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 3.549e-65
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 2
Query:  113 YSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            ++   W    ATFYGGSDASGTMGGACGYGNLY+QGYG  TAALSTALF++G SCG C+ + C    +P WC +G+ S+ VTATNFCPPNYALPSD+GGWCNPPRPHFD+A P + +I  YR GIVPV++RRVPCR++GG+RFT+ G  YF LVLVTNVA AG +  + V
Sbjct:   29 FAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGA-SVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEV 197          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 6.053e-65
Identity = 114/165 (69.09%), Postives = 131/165 (79.39%), Query Frame = 2
Query:  128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            W  AHATFYGG+DASGTMGGACGY +LYSQGYG   AALSTALFN+G SCG C++I C  +  P WC  G  ++ VTATNFCPPN+ LPSDNGGWCNPPRPHFD+A P + KI  YRAGI+PV Y+RVPC KKGG+RFTING  YFNLVLVTNVA  G I  +++
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGV-TVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 213          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.924e-64
Identity = 116/171 (67.84%), Postives = 135/171 (78.95%), Query Frame = 2
Query:  104 PGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            PG + G PW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFE+ C N+P WC  G  SI+VTATNFCPP        GG C+PP  HFDL+ P++ KIA Y++GI+PV YRRV C++ GGIRFTING  YFNLVLVTNV GAGD+  V++
Sbjct:   31 PGGHMG-PWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSM 191          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.400e-63
Identity = 118/194 (60.82%), Postives = 135/194 (69.59%), Query Frame = 2
Query:   32 MAVVNWAGVILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRV 610
            MA      ++ SL  L+  A A          W  A ATFYGGSDASGTMGGACGYG+LY  GYG  TAALSTALFN G SCGACF I C   +  WC  G+ SI VTATNFCPPNYAL  D GGWCNPPR HFD++ P +  IA YRAGIVPV+YRRVPC++ GGIRF +NG  YF LVLVTNV G+G + ++
Sbjct:    1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQM 185          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.262e-62
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 2
Query:   62 LSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEP--AWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            L   CL+W   A     ++   W  A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ I C  +    +C SG+ S+ +TATN CPPNYALP+D GGWCNPPR HFD+A P +LKI  Y  GIVPV Y+RVPC K+GG+RFTING  YF LVLV+NV G G I  V++
Sbjct:   16 LLATCLLWNEAA----SFTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSI 197          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.262e-62
Identity = 112/195 (57.44%), Postives = 142/195 (72.82%), Query Frame = 2
Query:   56 VILSLVCLMWVA--DARLP------GDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            V+L++V L+ +A  DA  P      G ++ GPW+ AHATFYGG D SGT+ GACGY +   +GYGV T A+ST LF  G  CGAC+E+KC + P  C  G+  ++VTATN CPPN    +DNGGWCNPPR HFDL+MP FL+IA+ +AGIVP+SYRRVPC K GGIR+TI G  YFNLV+V+NV GAGD+  ++V
Sbjct:   10 VVLAVVFLVALAAGDAAPPKVHRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSV 204          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.262e-62
Identity = 111/173 (64.16%), Postives = 130/173 (75.14%), Query Frame = 2
Query:  116 SGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSG------SPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            + G W  AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS  +F +GLSCGACFE++C         G        SI+VTAT+ CP N+ALP D GGWCNPP  HFDL+ P FL+IA +++GIVPVSYRRV CR+KGG+RFTING  YFNLVLV+NV GAGD+  V V
Sbjct:   26 AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAV 198          
The following BLAST results are available for this feature:
BLAST of CN181522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
EXP22_ORYSJ1.593e-6569.70Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ORYSJ2.081e-6568.48Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ2.717e-6560.31Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP29_ORYSJ3.549e-6565.29Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP24_ORYSJ6.053e-6569.09Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA5_ARATH3.924e-6467.84Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA8_ORYSJ7.400e-6360.82Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA1_ORYSJ1.262e-6261.50Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP32_ORYSJ1.262e-6257.44Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ORYSJ1.262e-6264.16Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181522 ID=CN181522; Name=CN181522; organism=Citrus sinensis; type=EST; length=617bp
GAGGTTTGTGAGTGAAGAGAATAAAGAAACGATGGCGGTGGTGAATTGGG
CTGGCGTTATCCTCTCTTTAGTATGCTTAATGTGGGTGGCTGATGCAAGA
CTCCCTGGCGATTACTCCGGTGGCCCATGGCAAAGCGCCCATGCCACCTT
TTACGGCGGCTCTGACGCCTCCGGCACCATGGGAGGAGCGTGCGGTTACG
GTAACTTGTACAGCCAGGGCTACGGCGTGAATACGGCGGCGCTGAGCACG
GCGCTGTTCAACAATGGCTTGAGCTGCGGTGCTTGCTTTGAGATCAAGTG
TGCAAACGAACCCGCGTGGTGTCACTCCGGGAGCCCTTCCATTTTGGTTA
CCGCTACAAACTTTTGCCCGCCCAATTACGCACTCCCAAGTGACAATGGC
GGCTGGTGTAACCCTCCTCGCCCTCATTTTGACCTCGCCATGCCCATGTT
CCTCAAGATTGCTGAGTACCGCGCCGGCATCGTCCCCGTCTCCTACCGCC
GGGTACCATGCCGCAAGAAGGGAGGAATCAGGTTCACAATAAACGGGTTC
CGCTACTTCAACTTGGTTCTGGTCACCAACGTGGCGGGTGCAGGGGATAT
CCTGAGGGTGAACGTGA
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