CN181522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 108/183 (59.02%), Postives = 133/183 (72.68%), Query Frame = 2 Query: 56 VILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDI 601 + LSL C +RL G+ + W SA ATFYGGSDASGTMGG+CGYGN+YS GYG NT ALS+AL+ +G SCGAC+ + C A+ WC +G+ S+ VTATN+CPPNY+ D GGWCNPPR HFD++ P + IA Y +GIVPV Y R PCR+ GGIRF I G Y+ LVLVTNVAG+G + Sbjct: 9 LFLSLCCA-----SRLRGE-AAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAV 184
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.557e-57 Identity = 100/165 (60.61%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 107 GDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDI 601 G Y GPW+ AHATFYG TMGGACGYGNL++ GYG++TAALST LFN+G CG CF+I C+ P C+SG S +VTATN CPPN+ S+ GGWCNPPR HFD+A P F+K+A +RAGI+PV+YRRVPC++ GG+RF G Y+ L+ V NV GAGDI Sbjct: 30 GYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPH-CYSGK-STVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDI 192
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.352e-56 Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = 2 Query: 50 AGVILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGG--WCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDI 601 A VI+SL DA+ + W AHATFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C A C+ GSP+I VTATN CPPN+A D GG WCNPPR HFDL+ P F+++A++RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ Sbjct: 15 AAVIISLAGAATTVDAK----FRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGT-ASCYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDV 195
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.329e-55 Identity = 100/165 (60.61%), Postives = 120/165 (72.73%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFN+G SCG C+ I C + P WC G +I VT TN+CPPNY LP GGWCN RPHFD++ P + I Y AGI+P+ Y++V C + GG+RFTINGF YF LVLVTN+AG+G I ++V Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSV 184
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 4.808e-54 Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+EI C +P WC G S+ +TATNFCP NY+ +D WCNPP+ HFDL++ MFLKIA+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V V Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQV 216
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 4.808e-54 Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+EI C +P WC G S+ +TATNFCP NY+ +D WCNPP+ HFDL++ MFLKIA+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V V Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQV 210
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 4.808e-54 Identity = 100/165 (60.61%), Postives = 119/165 (72.12%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANE--PAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFNNG SCG C+ I C + P+ C G+ +I VT TNFCPPNY LP GGWCN RPHFD++ P + I Y AGIVP+ Y++V C + GG+RFTI G YF LVLVTN+AG+G I ++V Sbjct: 23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLP--YGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSV 184
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 3.116e-53 Identity = 93/163 (57.06%), Postives = 117/163 (71.78%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC++I C N+P WC G S+ +TATNFCPP+Y+ G WCNPP+ HFDL++PMFLKIA+Y+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + V Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPG--SVKITATNFCPPDYS--KTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQV 206
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 5.315e-53 Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W ATFYG + T GACGYG+L+ QGYG+ TAALSTALFNNG CGAC+EI C + P WC G SI +TATNFCPP++ P+DN WCNPP+ HFDL+ PMFLKIA+Y+AG+VPV +RRVPC K GG++F I G +F ++L NV GAG + + + Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPG--SIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQI 248
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.020e-52 Identity = 92/163 (56.44%), Postives = 117/163 (71.78%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC++I C ++P WC G+ I +TATNFCPP+Y+ G WCNPP+ HFDL++PMFLKIA+Y+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + V Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGT--IKITATNFCPPDYS--KTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQV 213 The following BLAST results are available for this feature:
BLAST of CN181522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181522 ID=CN181522; Name=CN181522; organism=Citrus sinensis; type=EST; length=617bpback to top |