CN181522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 7.184e-50 Identity = 91/170 (53.53%), Postives = 114/170 (67.06%), Query Frame = 2 Query: 113 YSGGPWQSAHATFYGGSDASGT-MGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 Y W ATFYG G GGACGY N Y TAALST LF +G CG C+E++C P WC+ GSPS+++T TN CPPN+ LP+D+GGWCNPPR HFD+A P FLK+A+ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ ++V Sbjct: 47 YKTSDWHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSV 215
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.692e-47 Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W ATFYGG+D SGTMGGACGYGNLY Q YG+N AALST LFN+G SCG C+ I C P WC G +I VT TN+ GGWCN RP+FD++ P + I Y AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G I+ ++V Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSV 175
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 4.819e-46 Identity = 84/163 (51.53%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W+ A AT+Y ++ +GGACGYG+L GYG+ T LS LF G CGACFE++C ++ WC G+ SI++TATNFC PNY D GG CNPP HF L + F KIA ++AG +PV YRR+ CRK+G +RFT++G F VL+TNVAG+GDI V + Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGT-SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKI 201
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 82/163 (50.31%), Postives = 114/163 (69.94%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W+SA A++Y +D +GGACG+G+L GYG+ T LSTALF G +CG C+E+KC ++ +C G+ SI+VTATNFC PN+ LP+D GG CNPP HF L + F KIA ++AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ V + Sbjct: 33 WRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKI 193
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.890e-44 Identity = 88/186 (47.31%), Postives = 121/186 (65.05%), Query Frame = 2 Query: 68 LVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEY-RAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 LV ++ + G S G W AHAT+YG +D+ ++GGACGY N Y G+G +TAALS LF +G SCG C++++C +P WC G+ ++ VTATNFCP N +N GWCN PR HFD++ P F +IA GIVPV YRRV C+++GG+RFT+ G FN+V+++NV G G + V V Sbjct: 8 LVTVILLVSTLSVGMCSNG-WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGA-AVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAV 186
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.451e-42 Identity = 84/184 (45.65%), Postives = 117/184 (63.59%), Query Frame = 2 Query: 71 VCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 +CL ++ RL + W+ A AT D S ++ GGACGYG+L + +A LS LFN G SCGAC E++C N WC GSPS++VTAT+FCPPN L SD GGWCN P+ H +L+ F IAE RA ++P+ YRRV C ++GG+RF+++G +F VL++NV G+++ V V Sbjct: 10 LCLFFIL-CRLFQATAEDDWKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKV 192
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42 Identity = 86/163 (52.76%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGT-MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVN 613 W A A +YG GT + GACGYG+L GYG+ TAALSTALFN+G SCGAC+EI C+ P C SGS I +TAT+ CPP A WC P HFDL++PMF+KIA+ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ V+ Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGS--IKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVS 198
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.358e-40 Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 2 Query: 182 GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 GGACGYG+L YG TA +S ALF G +CG C+E++C N WC GSP+++VTAT+FC PN L D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V V Sbjct: 52 GGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKV 196
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.451e-39 Identity = 86/171 (50.29%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 107 GDYSGGPWQSAHATFYGGSDASGTM-GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 G Y GPW HATFYGG DASGT GGACGY + + GYG TAA+S ALF+NG CGAC+E+K +++VTATN PP NG HFDL MP FL IAE + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD++++ V Sbjct: 75 GRYKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--------GDSGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTV 226
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19 Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG---GIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616 W AT+YG ++ SGT GGACGY G++ + AA S +++ +G CG+C+++KC+ P+ SG P + V T+ CP GG C HFDL+ F +A+ AG +PV Y RVPC+ +G R +Y+ VLV + G GD+ V++ Sbjct: 38 WSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSC--SGKP-VTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDL 199 The following BLAST results are available for this feature:
BLAST of CN181522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181522 ID=CN181522; Name=CN181522; organism=Citrus sinensis; type=EST; length=617bpback to top |