CN181522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18 Identity = 60/176 (34.09%), Postives = 85/176 (48.30%), Query Frame = 2 Query: 119 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFR--YFNLVLVTNVAGAGDILRVNV 616 G W S AT+YGG G+ GGACGY + Q + AA +LF NG CG+C++IKC A SG P + V T+ CP GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V++ Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRAC--SGRP-VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHI 205
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17 Identity = 68/193 (35.23%), Postives = 93/193 (48.19%), Query Frame = 2 Query: 98 RLPGDYSGGP-------WQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTI----NGFRYFNLVLVTNVAGAGDILRVNV 616 R +Y+G P W +A AT+YG + G+ GGACGY Q + AA S +L+ G CGAC+E+KC A SG P+ +V T+ CP GG C HFD++ +A+ AGI+ V YRRVPC+ G I F + N F YF VL+ G GD+ V++ Sbjct: 47 RAHNNYTGSPSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAAC--SGQPATVV-ITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPF-YFE-VLIEFEDGDGDLNAVDL 225
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16 Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTI-----NGFRYFNLVLVTNVAGAGDILRVNV 616 W + AT+YG ++ +G+ GGACGY G ++ + AA S +++ +GL CG+C+++KC A SG+P + V T+ CP GG C HFDL+ F +A AG++ + Y RVPC GG++ T + YF VLV G GD+ V + Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSAC--SGNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYF-AVLVKYENGDGDLSGVEL 198
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 59/205 (28.78%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 59 ILSLVCLMWVADARLPGDYSGGP------WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV 616 + S + + VA AR PG++S W+ A AT+YG +G GGACG+ N + T+ + +F +G CG+C++I+C N PA C ++++T N+ P + + HFDL+ F +A+ AGI+ + ++RVPC G++ T + N VLV G GD+++V++ Sbjct: 14 LFSFLVVTCVAGAR-PGNFSASDFTADPNWEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS--------------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFP-GLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDL 201
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15 Identity = 58/171 (33.92%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYSQG-YGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTI-----NGFRYFNLVLVTNVAGAGDI 601 W + AT+YG ++ +G+ GGACGY Q + AA S +++ +GL CG+C+++KC+ A SG+P + V T+ CP GG C HFDL+ F +A AG++ + Y RVPC GG+ T + YF VLV G GD+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSAC--SGNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDL 193
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15 Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 119 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTI--NGFRYFNLVLVTNVAGAGDILRVNV 616 GG W +A AT+YG + +G GGACG+ N+ + T+ + LF +G CG+C++I+C PA C ++++T N+ P + HFDL+ F +A+ AGI+ + +RRVPC+ G + F + + +LV G GD+++V++ Sbjct: 89 GGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPA-CSGLPETVIITDMNYYPVSLY--------------HFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDL 251
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15 Identity = 57/169 (33.73%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRA-------GIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDI 601 W+ A AT+YG ++ G+ GGACGYG+L ++S LF +G CGAC+++KC + C + +++V T+ CP GG C R HFDL+ F ++A A G + V YRR C+ G I F +N ++ +LV G GDI Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDH-GICSRRAVTVIV--TDECP---------GGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDI 204
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 57/169 (33.73%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 128 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDI 601 W A AT+YG +D G+ GGACGYG L A+S LF G CGAC++++C + + C + +++V T+ CP GG C R HFDL+ F ++A G + V YRR C+ G I F +N ++ +LV G GDI Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIV--TDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDI 201
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14 Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 2 Query: 116 SGGPWQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIA-------EYRAGIVPVSYRRVPCRKKG-GIRFTIN--GFRYFNLVLVTNVAGAGDI 601 S W A AT+YG + G+ GGACGYG L + A++ LF NG CGAC++++C ++ + C + ++++ T+ CP C+ HFDL+ +F ++A G++PV YRR C+ +G I F +N ++ +LV G GDI Sbjct: 32 SNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDK-SICSRRAVTVII--TDECP-----------GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDI 190
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13 Identity = 55/177 (31.07%), Postives = 86/177 (48.59%), Query Frame = 2 Query: 125 PWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIA------EYR-AGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV 616 PW A AT+YG SG+ GGACG N+ Y + + +F +G CG+C+E+KC +PA C ++ +T N+ P + HFD + F +A E R AGI+ + +RRV C+ GG + T + + N VLV VA GD++++++ Sbjct: 42 PWLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPIS--------------AYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDL 203 The following BLAST results are available for this feature:
BLAST of CN181522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181522 ID=CN181522; Name=CN181522; organism=Citrus sinensis; type=EST; length=617bpback to top |