CN188596

Overview
NameCN188596
Unique NameCN188596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_HEVBR (Profilin-1 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 7.607e-60
Identity = 106/129 (82.17%), Postives = 119/129 (92.25%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVD+ L+CEIEGNHL+AAAIIG DGSVWA S NFPQ K EEIT IM+DF+EPGTLAPTGL+LGGTKYMVIQGE GAVIRGKKGPGGVT++KT+ ALIIGIYD+PMTPGQCNMIVERLGDYL++QG+
Sbjct:    3 WQTYVDERLMCEIEGNHLTAAAIIGQDGSVWAQSSNFPQFKSEEITAIMSDFDEPGTLAPTGLHLGGTKYMVIQGEAGAVIRGKKGPGGVTVRKTNQALIIGIYDEPMTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_LILLO (Profilin-1 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.935e-60
Identity = 102/129 (79.07%), Postives = 116/129 (89.92%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVDDHL+C+++G HL+A+AI+GHDGS+WA S  FPQ KPEEITGIMNDF EPG+LAPTGLYL G KYMVIQGEPGAVIRGKKG GGVTIKKT  ALI GIY++PMTPGQCNM+VER+GDYL+DQGL
Sbjct:    3 WQTYVDDHLMCDVDGQHLTASAIVGHDGSIWAQSAGFPQFKPEEITGIMNDFAEPGSLAPTGLYLAGMKYMVIQGEPGAVIRGKKGSGGVTIKKTGQALIFGIYEEPMTPGQCNMVVERMGDYLVDQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_ANACO (Profilin OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.298e-59
Identity = 101/128 (78.91%), Postives = 117/128 (91.41%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHL+CEI+G HLS+AAI+GHD +VWA S NFPQ KPEEI+ I+NDF  PG+LAPTGLYLGGTKYMVIQGEPG VIRGKKG GG+T+KKT+ ALIIG+YD+PMTPGQCNM+VERLGDYL++QG
Sbjct:    3 WQAYVDDHLMCEIDGQHLSSAAILGHDSTVWAQSPNFPQFKPEEISAILNDFENPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGTGGITVKKTNLALIIGVYDEPMTPGQCNMVVERLGDYLLEQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_PYRCO (Profilin OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.695e-59
Identity = 104/129 (80.62%), Postives = 119/129 (92.25%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQAYVDDHL+C+I+G+HL+AAAI+GHDGSVWA S  FP+ KPEEIT IM DF+EPG+LAPTGL+LGGTKYMVIQGE GAVIRGKKG GGVT+KKTS AL+ GIY++P+TPGQCNMIVERLGDYLIDQGL
Sbjct:    3 WQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_LILLO (Profilin-2 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.695e-59
Identity = 103/128 (80.47%), Postives = 118/128 (92.19%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQ YVD+HL+CEI+G HL+AAAIIGHDGS+WA SE+FPQ+K E+ITG+MNDF EPG+LAPTGL+LG  KYMVIQGEPGAVIRGKKG GGVTIKKT+ ALI+GIYD+PMTPGQCNM+VERLGDYL DQG
Sbjct:    3 WQTYVDEHLMCEIDGQHLTAAAIIGHDGSIWAQSESFPQVKSEQITGVMNDFAEPGSLAPTGLFLGDNKYMVIQGEPGAVIRGKKGSGGVTIKKTNMALIVGIYDEPMTPGQCNMVVERLGDYLYDQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_MUSAC (Profilin OS=Musa acuminata PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.213e-59
Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHLLC+I+G  L+AAAI+GHDGSVWA S+ FPQ KPEEI  IM DF+EPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKG GGVTIKKT+ ALIIGIY++PMTPGQCNM+VERLGDYL DQG
Sbjct:    3 WQAYVDDHLLCDIDGQCLTAAAIVGHDGSVWAQSDAFPQCKPEEIAAIMKDFDEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTNLALIIGIYNEPMTPGQCNMVVERLGDYLFDQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.891e-59
Identity = 101/129 (78.29%), Postives = 119/129 (92.25%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVD+HL+C+I+G+HL+AAAIIGHDGSVWA S +FPQ KPEE+  IM DF+EPG+LAPTGL+LGGTKYMVIQGEPGAVIRGKKG GG+T+KKT  ALIIGIYD+P+TPGQCNMIVERLGDYL++QG+
Sbjct:    3 WQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_WHEAT (Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.891e-59
Identity = 103/128 (80.47%), Postives = 115/128 (89.84%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHL CEI+G HL++AAI+GHDGSVWA S NFP+ KPEEI GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT  ALI+GIYD+PMTPGQCN++VERLGDYLIDQG
Sbjct:    3 WQAYVDDHLCCEIDGQHLTSAAILGHDGSVWAESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_PHLPR (Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.874e-58
Identity = 98/129 (75.97%), Postives = 118/129 (91.47%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVD+HL+CEIEG+HL++AAI+GHDG+VWA S +FPQ KPEEITGIM DF+EPG LAPTG+++ G KYMVIQGEPGAVIRGKKG GG+TIKKT  AL++GIYD+PMTPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQTYVDEHLMCEIEGHHLASAAILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_APIGR (Profilin OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.447e-58
Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQAYVDDHL+CE+EGN    L+AAAIIGHDGSVWA S  FPQ+KPEEI GIM DF+EPG LAPTGLYLGG KYMVIQGEP AVIRGKKG GGVTIKKT  AL+ G+YD+P+TPGQCN+IVERLGDYLIDQGL
Sbjct:    3 WQAYVDDHLMCEVEGNPGQTLTAAAIIGHDGSVWAQSSTFPQIKPEEIAGIMKDFDEPGHLAPTGLYLGGAKYMVIQGEPNAVIRGKKGSGGVTIKKTGQALVFGVYDEPVTPGQCNVIVERLGDYLIDQGL 134          
The following BLAST results are available for this feature:
BLAST of CN188596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PROF1_HEVBR7.607e-6082.17Profilin-1 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_LILLO9.935e-6079.07Profilin-1 OS=Lilium longiflorum PE=2 SV=1[more]
PROF_ANACO1.298e-5978.91Profilin OS=Ananas comosus PE=1 SV=1[more]
PROF_PYRCO1.695e-5980.62Profilin OS=Pyrus communis PE=1 SV=1[more]
PROF2_LILLO1.695e-5980.47Profilin-2 OS=Lilium longiflorum PE=2 SV=1[more]
PROF_MUSAC2.213e-5982.81Profilin OS=Musa acuminata PE=1 SV=1[more]
PROF3_HEVBR2.891e-5978.29Profilin-3 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF2_WHEAT2.891e-5980.47Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1[more]
PROF2_PHLPR1.874e-5875.97Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1[more]
PROF_APIGR2.447e-5880.30Profilin OS=Apium graveolens PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188596 ID=CN188596; Name=CN188596; organism=Citrus sinensis; type=EST; length=612bp
TTTTTTTTTTTTCCTTTCCCACACAGTTCCCATAACTTTGAATACTGTAA
CCTTTTAAGGCCGCAAGTTAACAGTGCGAGCTTTTTAGGGACCCTAAGAA
ATGAAACAAATTAGCGGACATGCAAACCACCTAAAGACCCTGATCAATGA
GATAATCACCAAGCCTTTCAACAATCATGTTGCACTGCCCAGGGGTCATC
GGGTCGTCATAGATTCCAATGATTAAGGCCGCACTGGTCTTCTTGATGGT
AACACCACCAGGGCCCTTCTTCCCTCGGATGACAGCACCTGGCTCACCCT
GGATCACCATATATTTTGTGCCACCAAGATACAGTCCAGTTGGTGCTAGT
GTTCCAGGTTCATTAAAGTCATTCATGATACCAGTTATTTCCTCAGGTTT
TAACTGAGGGAAGTTTTCACTCGGGGCCCAAACGCTGCCGTCGTGGCCGA
TGATAGCGGCAGCTGAAAGATGGTTACCCTCAATTTCACACAACAGATGA
TCATCGACGTAAGCTTGCCACGACATCTTTTTCTGCTTTGATGATTCCTC
TGATTTCTCTGTGAATTTTTTTTTTTCCTGAAGCCTTTTTACAAATGAGT
GTGTTTAAGCCT
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