CN188596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_CITSI (Profilin OS=Citrus sinensis PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 7.368e-55 Identity = 97/129 (75.19%), Postives = 114/129 (88.37%), Query Frame = -3 Query: 134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQAYVDDHL+C+I+GN L+AAAI+G DGSVW+ S FP + EEI I+ DF++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+ +KKT+ ALIIGIYD+P+TPGQCNMIVERLGDYLI+QGL Sbjct: 3 WQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFRLEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGIIVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.623e-55 Identity = 98/129 (75.97%), Postives = 110/129 (85.27%), Query Frame = -3 Query: 134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQ+YVDDHL+CE+EGNHL+ AAI G DGSVWA S FPQLKP EI GI DF E G LAPTGL+LGG KYMV+QGE GAVIRGKKGPGGVTIKKT+ AL+ GIYD+PMT GQCN++VERLGDYLI+ GL Sbjct: 3 WQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF4_ARATH (Profilin-4 OS=Arabidopsis thaliana GN=PRO4 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.257e-54 Identity = 95/132 (71.97%), Postives = 116/132 (87.88%), Query Frame = -3 Query: 134 WQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQAYVD+HL+C++ +G+HL+AAAIIGHDGSVWA S NFPQ KP+EIT IM DF+EPG LAPTG++L G KYMVIQGEP AVIRGKKG GG+TIKKT +++ G+Y++P+TPGQCNM+VERLGDYLI+QGL Sbjct: 3 WQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQGL 134
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_TOBAC (Profilin-1 OS=Nicotiana tabacum GN=PRO1 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.144e-54 Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = -3 Query: 137 WQAYVDDHLLCEIEG---NHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520 WQ YVDDHL+ +IEG +HL+AAAI+GHDGSVWA S FP+ KPEEIT IM DF+EPG LAPTGL+LGG KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI GIY++P+TPGQCNM+VE++ DYL+DQG Sbjct: 3 WQTYVDDHLMADIEGQQGHHLAAAAILGHDGSVWAQSSTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIRDYLVDQG 133
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.657e-54 Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = -3 Query: 134 WQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQ YVD+HL+C+I+G ++ A+AI+GHDGSVWA S +FPQ KP+EITGIM DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKG GG+TIKKT AL+ GIY++P+TPGQCNM+VERLGDYLIDQGL Sbjct: 3 WQTYVDEHLMCDIDGQASNSLASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF3_TOBAC (Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.064e-53 Identity = 95/130 (73.08%), Postives = 113/130 (86.92%), Query Frame = -3 Query: 137 WQAYVDDHLLCEIEGN--HLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520 WQ YVDDHL+ + EG HL+AAAI+GHDGSVWA S +FP+ KPEEIT IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI G+Y++P+TPGQCNM+VE++GDYL+DQG Sbjct: 3 WQTYVDDHLMVDFEGQGQHLAAAAILGHDGSVWAQSPHFPKFKPEEITNIMKDFDEPGFLAPTGLFLAGIKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGLYEEPVTPGQCNMVVEKIGDYLVDQG 132
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 6.896e-53 Identity = 91/131 (69.47%), Postives = 115/131 (87.79%), Query Frame = -3 Query: 134 WQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQAYVD+HL+C+IEG +HL++AAI+GHDG+VWA S NFPQ KPEE+ GI+ +F++ GTLAPTG+++ G KYMV+QGE GAVIRGKKG GG+ IKKT AL++GIYD+P+ PGQCNM+VERLGDYLIDQG+ Sbjct: 3 WQAYVDEHLMCDIEGTGHHLTSAAILGHDGTVWAQSSNFPQFKPEEMKGIITEFDQAGTLAPTGMFIAGAKYMVLQGEQGAVIRGKKGAGGICIKKTGQALVMGIYDEPVAPGQCNMVVERLGDYLIDQGM 133
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_ARTVU (Profilin-2 OS=Artemisia vulgaris PE=1 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53 Identity = 93/131 (70.99%), Postives = 113/131 (86.26%), Query Frame = -3 Query: 134 WQAYVDDHLLCEIEGN--HLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQ YVDDHL+C+IEG HL+AAAI+G DG+VWA S+ FP+ KPEE+ GI+N+FNE GTLAPTGL+LGG KYMV+QGE GAVIRGKKG GG+ IKKT A+++GIYD+P+ PGQCNMIVERLGDYL+DQ + Sbjct: 3 WQTYVDDHLMCDIEGTGQHLTAAAILGLDGTVWAKSDKFPEFKPEEMKGIINEFNEVGTLAPTGLFLGGAKYMVLQGEAGAVIRGKKGAGGICIKKTGQAMVMGIYDEPVAPGQCNMIVERLGDYLVDQNM 133
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF3_ARATH (Profilin-3 OS=Arabidopsis thaliana GN=PRO3 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.536e-52 Identity = 91/132 (68.94%), Postives = 113/132 (85.61%), Query Frame = -3 Query: 134 WQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQ YVD+HL+C++ +G+HL+AAAI+GHDGSVWA S NFPQ K +E + IM DF+EPG LAPTGL++ G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY++P+TPGQCNM+VERLGDYL++QGL Sbjct: 3 WQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEPGHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQGL 134
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 7.624e-52 Identity = 92/132 (69.70%), Postives = 110/132 (83.33%), Query Frame = -3 Query: 134 WQAYVDDHLLCEI---EGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520 WQ YVD+HL+C++ +G+HL+AAAI GHDGSVWA S NFPQ K +E IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY++P+TPGQCNM+VERLGDYLI+Q L Sbjct: 3 WQTYVDEHLMCDVGDGQGHHLAAAAIFGHDGSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134 The following BLAST results are available for this feature:
BLAST of CN188596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188596 ID=CN188596; Name=CN188596; organism=Citrus sinensis; type=EST; length=612bpback to top |