CN181520

Overview
NameCN181520
Unique NameCN181520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30
Identity = 70/169 (41.42%), Postives = 91/169 (53.85%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDC-GGLLQCQAY-GSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCN-----SGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  D +G+  C+T DC  G L C    G PP TLAEF +      DF D+S +DGFN+PM  +   G G  ++  C A++   CP+EL+  G       C   C  F   ++CC        KC PT +S+ F E+CPDAYSY  DD   +FTC GG NY + FCP
Sbjct:   74 RTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.317e-29
Identity = 68/169 (40.24%), Postives = 87/169 (51.48%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  D +G+  C T DC  G + C   G+ PP TLAEF +      DF D+S +DGFN+PM  +   G G  +   C A++   CP+EL+  G       C   C  F T ++CC   +     C PT +S  F   CPDAYSY  DD    FTC GG NY + FCP
Sbjct:   77 RTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28
Identity = 64/169 (37.87%), Postives = 88/169 (52.07%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  D AG+  C+T DCG G + C   G+ PP TL E  +      D+ D+S +DGFN+PM  +   G G  +   C A++   CP +L+V         C   C  F   ++CC         C PT++S  F+++CP AYSY  DD  S FTC GG +Y + FCP
Sbjct:   44 RTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28
Identity = 66/169 (39.05%), Postives = 85/169 (50.30%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  D +G+  C T DCG G + C   G+ PP TL E  +      DF D+S +DGFN+PM  +   G G  +   C ADI + CP  L+V G       C   C  F   ++CC         C P  +S+ FK +CP AYSY  DD +S FTC G   Y + FCP
Sbjct:   78 RTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.003e-27
Identity = 64/169 (37.87%), Postives = 88/169 (52.07%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  D AG+  C+T DCG G + C   G+ PP TL E  +      D+ D+S +DGFN+PM  +   G G  +   C A++ + CP  L+V         C   C  F   ++CC         C PT++S  F+++CP AYSY  DD  S FTC GG +Y + FCP
Sbjct:   78 RTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.234e-27
Identity = 63/169 (37.28%), Postives = 92/169 (54.44%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C  + +G+  C+T DC  G + C   G+ PP +L E  +   + +DF D+S +DG+N+P+  ++  G G  +   C A++   CP EL+V G       C   C  F   ++CC         C  TK+SR FK++CP AYSY  DD+TS FTC G  +Y + FCP
Sbjct:   76 RTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.918e-27
Identity = 68/169 (40.24%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQ-AYGSPPNTLAEFALNQFQN-LDFIDISNIDGFNVPMEFSSVSGGCN-RVIRCTADIVRQCPNELRV------PGGCNGPCPVFKTEEHCC-----NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            R  C FD  GRG C TGDCGG+L+C  A G+ P T+ E  L    + + F D+S +DGFN P+  ++V GG       C AD+   CP+ L V        GC   C     + +CC     +   C PT FS  FK  CP AYSY  DDATS+  C     Y + FCP
Sbjct:   82 RRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = -3
Query:  149 RTNCQFDGAGRGRCQTGDCGGLLQCQAYG-SPPNTLAEFALNQFQNLDF--IDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPG--------GCNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFC 610
            RT C +   G+  C TGDCGG ++C   G + P TLA+F L+   + DF    +S +DGFN+P+  +   G G   V+ C A+++  CP  L+           GC   C  FK++E CC +       C P+ +S+FFK  CP  ++Y  D  + +  C      KV+FC
Sbjct:   83 RTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLHH-GHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20
Identity = 57/155 (36.77%), Postives = 70/155 (45.16%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C FDG+GRG C TGDC G L C   G  P TLAEF +   Q  DF D+S IDG+NV M FS           C++ +   C +                                      RCPDAY +P+D+ T    C G +NY+VVFCP
Sbjct:   74 RTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIGGSQ--DFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.233e-18
Identity = 56/155 (36.13%), Postives = 65/155 (41.94%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C F+G G G CQTGDCGG L C   G PP TLAEF +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   68 RTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
The following BLAST results are available for this feature:
BLAST of CN181520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
TLP2_PRUPE4.809e-3041.42Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV5.317e-2940.24Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1B_MALDO7.678e-2837.87Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP1_PRUPE7.678e-2839.05Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TP1A_MALDO1.003e-2737.87Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_CASSA2.234e-2737.28Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ORYSJ2.918e-2740.24Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
OLP1_SOLLC4.820e-2233.92Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLP_ORYSJ7.696e-2036.77Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PR1A_HORVU3.233e-1836.13Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181520 ID=CN181520; Name=CN181520; organism=Citrus sinensis; type=EST; length=612bp
CGCCCGAGGATTTATTAATGTGACGCGGCTTTGAAGCCACAAAGGCAAAT
TAAAGCCTTATTCCTTACACATAGATTGCAGCGACCATACAACGTATAGC
AGATAATTCCAACCAACAAATGATAGGCAGCTGACTCAGTCTTCACGGGC
AGAACACAACCTTATAATTAGTCCCACCAGGACAAGTGAAAACGCTTGTT
GCATCATCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTTGAAAAA
CCTGGAGAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGTGCTCTT
CGGTCTTGAACACGGGACATGGCCCATTACATCCTCCTGGAACCCTCAAT
TCATTCGGGCACTGCCTGACAATATCAGCCGTACATCTAATCACACGGTT
GCATCCTCCGGACACCGAACTGAATTCCATAGGAACATTAAACCCATCAA
TGTTCGAAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGTGCAAAT
TCAGCTAAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAGTAGTCC
CCCACAGTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGAATTGGC
AGTTGGTCCTAG
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