CN188594

Overview
NameCN188594
Unique NameCN188594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE G DYW+VKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  303 GYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANP-RGLCGIAMRASY 350          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            G  TE   DYW VKNSWG +WGE GYIR+ERN+A + +GKCGIA+  SY
Sbjct:  167 GRETENDKDYWTVKNSWGKNWGESGYIRVERNIAES-SGKCGIAISPSY 214          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  294 GYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  294 GYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGT+ G +YWIV+NSWG +WG  GYI MERNVA +  G CGIA   SY
Sbjct:  164 GYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASS-AGLCGIAQLPSY 211          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE   DYW+VKNSWGSSWG+ GYI+M RN        CGIA E SY
Sbjct:  274 GYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG+  G DYWI++NSWG +WG+ GY++++RN+     GKCGIAM  SY
Sbjct:  299 GYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPF-GKCGIAMMPSY 346          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 33/50 (66.00%), Postives = 35/50 (70.00%), Query Frame = -1
Query:  589 GYGTE-KGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGT   G  YW VKNSWG  WGE GYIRMER ++    G CGIAMEASY
Sbjct:  292 GYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDK-EGLCGIAMEASY 340          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = -1
Query:  589 GYGT-EKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG  E G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  303 GYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = -1
Query:  589 GYGT-EKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG  E G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  303 GYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
The following BLAST results are available for this feature:
BLAST of CN188594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CPR3_ARATH4.869e-1265.31Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPGP1_ZINOF1.085e-1163.27Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
ACTN_ACTDE1.085e-1165.31Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH1.085e-1165.31Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ERVB_TABDI1.850e-1163.27Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP3_HOMAM1.850e-1163.27Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPR1_ARATH1.850e-1155.10Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSEP_RICCO5.383e-1166.00Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP2_HORVU7.030e-1166.00Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU7.030e-1166.00Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188594 ID=CN188594; Name=CN188594; organism=Citrus sinensis; type=EST; length=735bp
CTTTTTTAATACACAATTTGTTTGTGCATTGTTCGGATTCAACGCAGATA
CCATTCTTACAACGCTATATACAAAACCAACGTCCGAATAAATATTTAAC
AGACCATCCACCTGCCGGTACATTAACGTTTGAAATGAAATGCAGTAAAA
TGAACTAAGGCCGGGGAGAAACTCATTCACAAGCACGAATATCTTCATCC
TCGCTTCGGCCTTCCACTGCTCTTACAGTGCCAACTATAATTAAGCACTG
CTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCG
TCGCAATGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCC
CAGCACGAACATTACAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGG
TCATCACAGCAGGTGGCAGCCTCGAGCGGGCAGCATCCCCATGCAAAGCA
AGAGTTACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAG
AGTAATAATTGTCACACACAGCAGGAGGCTTTGTTGGAGATGGAGGAGAC
GGTCCGGGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTC
CATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCA
TCCTAATATAGCCACCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACA
ATCCAGTAATCAGCTCCCTTTTCTGTGCCATATCC
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