CN188594

Overview
NameCN188594
Unique NameCN188594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = -1 
Query:  589 GYGTE-KGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGT   G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM ASY
Sbjct:  294 GYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNIS-KKEGLCGIAMMASY 342
The following BLAST results are available for this feature:
BLAST of CN188594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
CYSEP_VIGMU7.030e-1164.00Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188594 ID=CN188594; Name=CN188594; organism=Citrus sinensis; type=EST; length=735bp
CTTTTTTAATACACAATTTGTTTGTGCATTGTTCGGATTCAACGCAGATA
CCATTCTTACAACGCTATATACAAAACCAACGTCCGAATAAATATTTAAC
AGACCATCCACCTGCCGGTACATTAACGTTTGAAATGAAATGCAGTAAAA
TGAACTAAGGCCGGGGAGAAACTCATTCACAAGCACGAATATCTTCATCC
TCGCTTCGGCCTTCCACTGCTCTTACAGTGCCAACTATAATTAAGCACTG
CTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCG
TCGCAATGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCC
CAGCACGAACATTACAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGG
TCATCACAGCAGGTGGCAGCCTCGAGCGGGCAGCATCCCCATGCAAAGCA
AGAGTTACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAG
AGTAATAATTGTCACACACAGCAGGAGGCTTTGTTGGAGATGGAGGAGAC
GGTCCGGGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTC
CATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCA
TCCTAATATAGCCACCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACA
ATCCAGTAATCAGCTCCCTTTTCTGTGCCATATCC
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