CN181509

Overview
NameCN181509
Unique NameCN181509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:605..1296. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.128e-76
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMVSSN ILY  GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGK+TIVLHNTCEDSLLAAPI+LDLVLLAELSTRIQLKAEGE KFHSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  360 SNVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.128e-76
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGK+TIVLHNTCEDSLL API+LDLVLLAELSTRIQLKAEGE K HSFHPVATILSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  360 SNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLRAPIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 4.286e-76
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAE+STRIQ K+E EGKFHSFHPVAT LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  360 SNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.629e-75
Identity = 138/151 (91.39%), Postives = 145/151 (96.03%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMV SNGILY PGEHPDHVVVIKYVP VGDSKRAMDEYTSEIFMGGKNTIV+HNTCEDSLLAAPI+LDLVLLAEL+TRIQ  +E EGKFHSFHPVAT+LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  360 SNVVDDMVGSNGILYEPGEHPDHVVVIKYVPCVGDSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.882e-64
Identity = 132/152 (86.84%), Postives = 135/152 (88.82%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMVSSN    G     P     IKYVPYV   +RAMDEYTSEIFMGGK+TIVLHNTCEDSLLAAPI+LDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  360 SNVVDDMVSSNVFFMGLVNTRPRW---IKYVPYVA-IERAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.306e-60
Identity = 109/151 (72.19%), Postives = 132/151 (87.42%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDM++SN ILY  GEHPDHV+VIKYVPYVGDSKRAMDEYTS+IFMGG NTIVLHNTCEDSLLAAPI+LDLV+LAE+++RI +K + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  360 SNVVDDMIASNNILYKQGEHPDHVIVIKYVPYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.385e-58
Identity = 110/151 (72.85%), Postives = 127/151 (84.11%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI+LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  354 SNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.086e-58
Identity = 111/151 (73.51%), Postives = 126/151 (83.44%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCEDSLLA+PI LDLVLL EL  RI  + E + +F +FH V +ILS+L KAPLVP GTPVVNA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  354 SNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.456e-57
Identity = 104/151 (68.87%), Postives = 127/151 (84.11%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            SNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  357 SNVVDDMVQSNPVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
BLAST of CN181509 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 7.601e-57
Identity = 104/151 (68.87%), Postives = 126/151 (83.44%), Query Frame = -3
Query:  238 SNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 690
            S+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  357 SSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
The following BLAST results are available for this feature:
BLAST of CN181509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_ORYSJ1.128e-7694.70Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU1.128e-7694.04Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_BRANA4.286e-7692.72Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH1.629e-7591.39Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_CITPA2.882e-6486.84Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_DICDI4.306e-6072.19Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA1.385e-5872.85Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1B_XENLA3.086e-5873.51Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_MACFA4.456e-5768.87Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_RAT7.601e-5768.87Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181509 ID=CN181509; Name=CN181509; organism=Citrus sinensis; type=EST; length=692bp
ATCTACTTGCAATACAAGAGATTTCATGCTCCGAAATGAGCTACAAAGGC
AATGGGCTACACTCCAGCACCTTCATTAAAAAAATAAAAGAGCAAACATA
CAGGACACACTAATATTAACCACAATTTCATGACACAAGACATTACAATC
AGTAATTAAATGGACCACCACAGCTTTGATTGGTGACAGAGAAAGGGAAA
ACCGGTTCTTCCACTTTTCTCCCCTGCAAGTTCTTCACTTGTATTCCAAA
ATCATGTTGTTCTCAGGAGCCAAGCCAACGCAAGCCCTCAGAATGTTCTC
AAGCATTGCACGCTGCTTCGACAGCGCATTCACCACTGGTGTGCCTGGAG
GGACCAGAGGAGCCTTGGTGAGGTAGCTGAGAATTGTAGCCACAGGGTGG
AAAGAGTGGAATTTGCCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTGCT
GAGTTCAGCCAGCAGAACCAAATCTAGAACGATTGGAGCAGCCAAAAGAG
AGTCCTCACACGTGTTGTGCAGCACAATGGTGTTCTTGCCACCCATGAAA
ATTTCTGATGTGTACTCATCCATGGCTCTCTTGCTATCGCCAACATATGG
CACATACTTGATGACCACAACGTGGTCGGGGTGTTCACCAGGCCCATAAA
GGATACCATTGCTGGAGACCATGTCATCAACAACATTACTTT
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