CN181498

Overview
NameCN181498
Unique NameCN181498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26
Identity = 71/192 (36.98%), Postives = 97/192 (50.52%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I G +VD+ SGKTF+T DP TGE +A++ +    DVD AV +A+Q      W   +  +R  I+ +  D                 GK        DI   A+ + YYAG A  I G  + +      YT REP+GV   I  WN+P  +   K +PALAAG  M+ KP+E TPL AL  A +   AGV
Sbjct:    8 RLYIGGAYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQQG--QREWAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26
Identity = 71/192 (36.98%), Postives = 97/192 (50.52%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I G +VD+ SGKTF+T DP TGE +A++ +    DVD AV +AR+      W   +  +R  I+ +  D                 GK        DI   A+ + YYAG A  I G  + +      YT REP+GV   I  WN+P  +   K +PALAAG  M+ KP+E TPL AL  A +   AGV
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREG--QREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26
Identity = 71/192 (36.98%), Postives = 97/192 (50.52%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I G +VD+ SGKTF+T DP TGE +A++ +    DVD AV +AR+      W   +  +R  I+ +  D                 GK        DI   A+ + YYAG A  I G  + +      YT REP+GV   I  WN+P  +   K +PALAAG  M+ KP+E TPL AL  A +   AGV
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREG--QREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.350e-26
Identity = 71/199 (35.68%), Postives = 103/199 (51.76%), Query Frame = 2
Query:   83 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            M  +   +L+I+G+ VD+ SGKTF+T++P TGE IA +    + DV+ AV++A +      W   +  ER  I+ +  +                 GK  +     DI   A+ + YYAG A  I G  L +  +   YT REP+GVV  I  WN+P  +   K +PALAAG  M+ KP+E TPL A+  A +   AGV
Sbjct:    1 MTTLPVQQLYIHGQRVDATSGKTFKTVNPATGEVIAEVQVASQADVERAVQSASEG--QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLRESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.764e-26
Identity = 71/199 (35.68%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   83 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            MP     +L+I G++V + SG+TF++I+P TGE +A++    + DVD AV +A +      W   +  +R  I+ +  D                 GK  S  +  DI   A+ L YYAG    I GE + +  +   YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E T L AL  A +   AG+
Sbjct:    1 MPRFAEQQLYIGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRESSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGL 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 73/199 (36.68%), Postives = 100/199 (50.25%), Query Frame = 2
Query:   83 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            M   +  KL+I+G +VD+ + +TF+ I+P  GE +A+I    KEDV+ AV AA +      W   +  ER  I+ +  D                 GK  S  +  DI   A+ L YYAG    I GE + +  +   YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E T L  L  A +   AGV
Sbjct:    1 MARFELQKLYIDGGYVDASNTETFDAINPANGEVLAQIQRAGKEDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 70/192 (36.46%), Postives = 96/192 (50.00%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G    + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT  EP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGCTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRHEPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 68/192 (35.42%), Postives = 100/192 (52.08%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I G +VD+ SG+TF+T+DP TGE +A + +    DV+ AV++AR+      W   +  +R  ++ +  +                 GK  +     DI   A+ + YYAG A  I G+ + +      YT REP+GV   I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AGV
Sbjct:    8 RLYIGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREG--QREWAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSALKLAEIYTEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_BURP8 (Betaine aldehyde dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 68/192 (35.42%), Postives = 100/192 (52.08%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I G++VD+ SG TF+T DP TGE +A + +  + D++ AV++AR+      W   +  +R  I+ +  D                 GK  +  +  DI   A+ + YYAG A  I G+ + +      YT REP+GV   I  WN+P  +   K +PALAAG  MI KP+E TPL A   A +   AGV
Sbjct:    8 RLYIGGDYVDATSGVTFDTFDPATGELLATVQQASEADIERAVQSAREG--QRAWAAMTAMQRSRILRRAVDLLRERNDELAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGQQIPLRAESFVYTRREPLGVTAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSASKLAEIYLEAGV 197          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDA_STAHJ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=aldA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2
Query:  107 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHL 661
            LFINGEF  S SG T    +P  GE +A++A+  K DVD AV+AA+ AFD   W + S  ER   +L+ +                  GK +      D+P  AN  +Y+A       G V ++        + EP+GVVG ++ WNFP  +   K++PALAAG T++++P+  TPL  +  A +
Sbjct:   16 LFINGEFQASESGDTLTVTNPANGEDLAKVAKASKSDVDKAVQAAQDAFDS--WSKTSKEERADYLLEISRRIHEKVEHFATIESLQNGKPYRETSTIDVPLTANQFKYFASVLTTDEGSVNEIDENTMSLVVNEPVGVVGAVVAWNFPILLASWKLAPALAAGNTIVIQPSSSTPLSLIELAKI 198          
The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
BETB_BURVG1.034e-2636.98Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCM1.034e-2636.98Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA41.034e-2636.98Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_STRMK1.350e-2635.68Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_PSEMY1.764e-2635.68Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
BETB_PSE142.303e-2636.68Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_ECO7I2.303e-2636.46Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_BURXL2.303e-2635.42Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
BETB_BURP82.303e-2635.42Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
ALDA_STAHJ2.303e-2635.14Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bp
GAGGTAATACCACAAAGATAGAGAAAGATAGAGAGAGATGGAGGGCAGTC
TTAGCAATGGAAGCTGCAAGTCTTTATTCAAGATGCCGGAGATCAAGTTC
ACGAAGCTGTTCATTAACGGAGAATTTGTTGATTCTGTTTCAGGGAAAAC
GTTTGAAACAATTGATCCAAGGACAGGAGAAGCAATAGCAAGAATTGCTG
AAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGCACGTCAGGCG
TTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAAGGAGAGGGAT
AATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAGGTATTAGCGG
TGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGCCAAAATGGGC
GACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTGGTGCAGCTGA
TAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTACAGGGCTACA
CGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCCCTGGAATTTT
CCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAGCCGCTGGGTG
CACAATGATTGTCAAGCCTGCTGAGCNAACTCCCCTTATTGCTCTTTATT
TTGCCCATCTTGCCAAGCTGGCTGGAGTAC
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