CN181498

Overview
NameCN181498
Unique NameCN181498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.661e-40
Identity = 93/197 (47.21%), Postives = 111/197 (56.35%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            EIK TK+FIN E+ +S SG+ F   +P TGE I  I E DK D D AV+AAR AF  G  W R   +ER  ++ K AD                 GK    A   D+ G   TLRYYAG ADKIHG  + +      +T  EPIGV G IIPWNFP  MF  K++PAL  G T+++KPAE TPL ALY   L K AG
Sbjct:   34 EIKHTKIFINNEWQNSESGRVFPVYNPATGEQICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAG 230          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.155e-40
Identity = 92/197 (46.70%), Postives = 111/197 (56.35%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I+ TKLFIN E+ DSVSGKTF   +P T E I  + E DKEDVD AVKAAR+AF  G PW     +ER  ++ K AD                 GK+ + A + D+      LRY AG ADKI G  + +      YT  EPIGV G I PWN P  +   K+ PAL  G T+IVKPAE TPL AL+ A L K AG
Sbjct:   17 KIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39
Identity = 91/198 (45.96%), Postives = 115/198 (58.08%), Query Frame = 2
Query:   86 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            P+I + +LFIN E+ D+VS KTF T++P TGE I  +AEGD+ DVD AVKAAR+AF  G PW R   +ER  ++   AD                 GK    +   D+       RY+AG ADK HG+ + M      +T  EPIGV G IIPWNFP  M   K++PALA G T+++K AE TPL ALY A L K AG
Sbjct:   32 PDIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPIGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAG 229          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39
Identity = 90/198 (45.45%), Postives = 115/198 (58.08%), Query Frame = 2
Query:   86 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            P+I + +LFIN E+ D+VS KTF T++P TGE I  +AEGD+ DVD AVKAAR+AF  G PW R   +ER  ++   AD                 GK    +   D+       RY+AG ADK HG+ + M      +T  EP+GV G IIPWNFP  M   K++PALA G T+++K AE TPL ALY A L K AG
Sbjct:   32 PDIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAG 229          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39
Identity = 90/197 (45.69%), Postives = 111/197 (56.35%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            E+KFTK+FIN E+ +S SGK F T +P T E I  + EGDK DVD AV+AA+ AF  G PW R     R  ++ + AD                 GK    A   D+ G   TLRY+AG ADKI G+ +     +  +T  EPIGV G I PWNFP  M   K++PAL  G TM++KPAE TPL ALY   L K AG
Sbjct:   28 EVKFTKIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRTLRYFAGWADKIQGKTIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAG 224          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.903e-39
Identity = 91/197 (46.19%), Postives = 111/197 (56.35%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I+ TKLFIN E+ +SVSGKTF   +P T E I  + E DKEDVD AVKAAR+AF  G PW     +ER  ++ K AD                 GK+ + A + D+      LRY AG ADKI G  + +      YT  EPIGV G I PWN P  +   K+ PAL  G T+IVKPAE TPL AL+ A L K AG
Sbjct:   17 KIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38
Identity = 90/200 (45.00%), Postives = 119/200 (59.50%), Query Frame = 2
Query:   86 PEIKFTK---LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            P IK+ +   LFIN EFV  V GKTF+ I+P   + I  + E  ++DVD+AV AAR AF+ GPW + + +ER  ++ K AD                 GK  + AK+ D+  +   LRYYAG ADKIHG+ +  +     YT  EP+GV G IIPWNFP  M+  K+ PA+AAG T+++K AE TPL ALY A L K AG
Sbjct:   11 PVIKYEQPLGLFINNEFVKGVEGKTFQVINPSNEKVITSVHEATEKDVDVAVAAARAAFE-GPWRQVTPSERGILINKLADLMERDIDTLAAIESLDNGKAFTMAKV-DLANSIGCLRYYAGWADKIHGQTIDTNPETLTYTRHEPVGVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAG 208          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38
Identity = 87/191 (45.55%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  107 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            LFI+GEFV    GKTFETI+P   + I  + E  ++DVD AV AAR+AF+ G W + + + R  ++ K AD                 GK  + A  GDI GAA  LRYY G ADKIHG+ +  +     YT  EPIGV G IIPWNFP  M+  K+ PA+A G T+++K AE TPL  LY A++ K AG+
Sbjct:   22 LFIDGEFVKGAEGKTFETINPSNEKPIVAVHEATEKDVDTAVAAARKAFE-GSWRQVTPSTRGRMLTKLADLFERDAEILASIEALDNGKSITMAH-GDIAGAAGCLRYYGGWADKIHGQTIDTNSETLNYTRHEPIGVCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKTAEQTPLSGLYAANVIKEAGI 210          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 7.633e-38
Identity = 87/192 (45.31%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  101 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            T LFIN EFV +V GKTF+ I+P T E I  + E  ++DVD+AV AAR+AF+ GPW + +   R  ++ K AD                 GK  S AK  D+P AA  LRYY G ADKI G+V+  +     Y  +EPIGV G IIPWNFP  M+  K+ PA+A G T+++K AE TPL A     L + AG
Sbjct:   18 TGLFINNEFVKAVDGKTFDVINPSTEEVICSVQEATEKDVDIAVAAARKAFN-GPWRKETPENRGKLLNKLADLFEKNADLIAAVEALDNGKAFSMAKNVDVPAAAGCLRYYGGWADKIEGKVVDTAPDSFNYIRKEPIGVCGQIIPWNFPILMWSWKIGPAIATGNTVVLKTAEQTPLSAYIACKLIQEAG 208          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.221e-37
Identity = 86/200 (43.00%), Postives = 114/200 (57.00%), Query Frame = 2
Query:   80 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            K PEIKFTK+FIN +FVDSV+GK +  I+P T + I  + EG K D+D AV+A + AF  G PW R   + R  ++ + AD                 GK +  A   DI      LRYYAG ADK  G+ + +      +T  EP+G+ G IIPWN+P  M   K++PAL+ G  ++VKPAE TPL ALY A L + AG
Sbjct:    9 KTPEIKFTKIFINNQFVDSVNGKAYSVINPCTTKKICDVQEGSKADIDKAVQACKLAFKRGTPWRRMDASRRGHLLYRLADLFERDIAYLSSLETLNTGKPYKSAYQ-DIVHCIQVLRYYAGWADKNMGQNIPVDGDFFSFTKHEPVGICGLIIPWNYPMLMMTWKMAPALSCGNCIVVKPAEQTPLTALYCASLMEEAG 207          
The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
AL1A2_CHICK3.661e-4047.21Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A... [more]
ALDH1_MACPR8.155e-4046.70Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
AL1B1_PONAB3.099e-3945.96Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1B1_HUMAN3.099e-3945.45Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1A3_HUMAN3.099e-3945.69Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH1_ELEED6.903e-3946.19Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
ALDH_EMENI2.623e-3845.00Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH_ASPNG2.623e-3845.55Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH_ALTAL7.633e-3845.31Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
CROM_ENTDO2.221e-3743.00Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bp
GAGGTAATACCACAAAGATAGAGAAAGATAGAGAGAGATGGAGGGCAGTC
TTAGCAATGGAAGCTGCAAGTCTTTATTCAAGATGCCGGAGATCAAGTTC
ACGAAGCTGTTCATTAACGGAGAATTTGTTGATTCTGTTTCAGGGAAAAC
GTTTGAAACAATTGATCCAAGGACAGGAGAAGCAATAGCAAGAATTGCTG
AAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGCACGTCAGGCG
TTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAAGGAGAGGGAT
AATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAGGTATTAGCGG
TGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGCCAAAATGGGC
GACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTGGTGCAGCTGA
TAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTACAGGGCTACA
CGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCCCTGGAATTTT
CCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAGCCGCTGGGTG
CACAATGATTGTCAAGCCTGCTGAGCNAACTCCCCTTATTGCTCTTTATT
TTGCCCATCTTGCCAAGCTGGCTGGAGTAC
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