CN181498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 46/185 (24.86%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 107 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHL 661 +FI+G+++ + + DP T E I +I D+E+ A++ + + S ++R I++K A+ GK +K+ ++ L+ A A ++ GE + L +T +EP+GV+G I P+NFP + K+ PA+A G ++++ P+ P++A+Y + Sbjct: 1 MFIDGKWIIR---EDIDVFDPYTLENIEKITALDREETKNAIEVTEKHKEI--MKNLSPSKRYKILMKVAEHLSSKKDFFAKTISIDVGKPIKQSKI-EVDRTLTALKLSAFYAKELRGETINSENGLI-FTKKEPLGVIGAITPFNFPLNLATHKIGPAIATGNSVVLHPSSKAPIVAIYLTKI 178
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 55/193 (28.50%), Postives = 91/193 (47.15%), Query Frame = 2 Query: 107 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679 L INGE + + T+++I+P T E IA +++ ++DVD A +AA +A+ W R+S +R +++ A GK A +GD + + YYA + ++ G+ + +PIG I PWNFP + + AG T+++KPAE TPL A + + AG+ Sbjct: 39 LVINGE--EKFTKDTYQSINPANTTEVIAEVSKATQKDVDDAFEAANEAYKS--WKRWSHKDRAEFLIRVAAIIRRRKEEISAVMVYEAGKPWDEA-VGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNKYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPLTAYKLMEILEEAGL 226
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 45/181 (24.86%), Postives = 88/181 (48.62%), Query Frame = 2 Query: 107 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALY 649 +FI+G+++ + + ++P T E I RI D+E+ A++ A + D + ++R +++K A+ GK +++ ++ R A A ++ GE + + +T +EP+GVVG I P+NFP + K+ PA+A G +++ P+ P+ A+Y Sbjct: 1 MFIDGKWI---LREDLDILNPYTLEIIERITALDREETKYAIEVATENKD--VMKELNPSKRYSLLMKIAEHISSKKDLFANTISVDVGKPIKQSRI-EVDRTITAFRLSALYAKELRGETIPSENEII-FTKKEPVGVVGAITPFNFPLNLITHKIGPAIATGNAVVLHPSSKAPITAIY 174
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: LADH_METM7 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0731 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 47/185 (25.41%), Postives = 87/185 (47.03%), Query Frame = 2 Query: 107 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHL 661 +FI+G+++ + DP T + I +I D+E+ A++ + + S ++R I++K A+ GK +K+ ++ R A A ++ GE + L +T +EP+GVVG I P+NFP + K+ PA+A G ++I+ P+ P+ A+Y + Sbjct: 1 MFIDGKWIIR---DDIDVFDPYTLKNIEKITALDREETKNAIEITEK--NKEVMKNLSPSKRYSILMKIAEQISLKKDLFAKTISIDVGKPIKQSKI-EVDRTLTAFRLSAFYAKELRGETINSENGLI-FTKKEPLGVVGAITPFNFPLNLITHKIGPAIATGNSVILHPSSKAPIAAIYLTKI 178
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: GABD2_MYCUA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 56/195 (28.72%), Postives = 82/195 (42.05%), Query Frame = 2 Query: 128 VDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK----------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679 + V + TID TG+ + I G EDV+ A AR+A W + +ER ++ ++ D GK WA ++ YYA ++ +LK + + GY +P GVVG I PWN+P T+ PAL AG +++KP TP AL A L AG+ Sbjct: 18 IKDVDARPTRTIDEVFTGKPLTTIPVGTAEDVEAAFAEAREA--QANWAKRPVSERAEVIRRYRDLVIENREFLMDLLQAEAGKAR-WAAQEEVVDLVANANYYA----RVSAGLLKPRTVQALLPGIGKTTVGY---QPKGVVGVISPWNYPMTLTASDSVPALIAGNAVVLKPDSQTPYCALACAELLYRAGL 202 The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 355
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bpback to top |