CN181498

Overview
NameCN181498
Unique NameCN181498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8291 contig Csv1_Contig8291:33..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNNELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOL6 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6 GN=betB PE=3 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
[Close]
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2 
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +L+I+G +  + SG+TFETI+P  G  +A +    +EDVD AVK+A+Q      W   +  ER  I+ +  D                 GK +S     DI   A+ L YYAG    + G  + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGL 197
The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
BETB_ECOLU1.221e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E1.221e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO571.221e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO241.221e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_SHIF81.595e-2736.98Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]
BETB_ECOSM1.595e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI1.595e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLC1.595e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL61.595e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS1.595e-2736.98Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bp
GAGGTAATACCACAAAGATAGAGAAAGATAGAGAGAGATGGAGGGCAGTC
TTAGCAATGGAAGCTGCAAGTCTTTATTCAAGATGCCGGAGATCAAGTTC
ACGAAGCTGTTCATTAACGGAGAATTTGTTGATTCTGTTTCAGGGAAAAC
GTTTGAAACAATTGATCCAAGGACAGGAGAAGCAATAGCAAGAATTGCTG
AAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGCACGTCAGGCG
TTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAAGGAGAGGGAT
AATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAGGTATTAGCGG
TGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGCCAAAATGGGC
GACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTGGTGCAGCTGA
TAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTACAGGGCTACA
CGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCCCTGGAATTTT
CCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAGCCGCTGGGTG
CACAATGATTGTCAAGCCTGCTGAGCNAACTCCCCTTATTGCTCTTTATT
TTGCCCATCTTGCCAAGCTGGCTGGAGTAC
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