CN181497

Overview
NameCN181497
Unique NameCN181497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.641e-18
Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  ++KF   E+ IK AN+   GL A + TK+L+ A  ++ ++    +W+NCY AF +  P+GG+KMSG GR+ G+ +L  Y +VK+
Sbjct:  408 AKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAFYAQAPFGGFKMSGNGRELGEYALAEYTEVKT 502          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.144e-18
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            K EIFGPVM+++ F   E+ I+ ANN K GLAAG+ ++ LN A+ V   +   I WIN +    S+ P GGYK SG GR+ G ++L+HY Q KS
Sbjct:  384 KEEIFGPVMSVLAFDDEEEVIRRANNTKYGLAAGVFSESLNRAHRVIHQLEAGICWINTWGESPSEMPVGGYKESGIGRENGVETLNHYTQTKS 477          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.800e-18
Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV+  + +   ++ I+ AN+ + GLAAG+ T+++  A+ ++  ++   +W+NCY  FD+  P+GGYK SG GR+ G  +L +Y +VKS
Sbjct:  394 AKEEIFGPVLTAIPYETVDEVIERANHSEYGLAAGLWTENVKQAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYALDNYTEVKS 488          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.776e-18
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  ++KF   E+ IK AN+   GL A + TK+L+ A  ++ ++    +WINCY A  +  P+GG+KMSG GR+ G+ +L  Y +VK+
Sbjct:  408 AKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWINCYNALYAQAPFGGFKMSGNGRELGEYALAEYTEVKT 502          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.146e-18
Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            + EIFGPV+A+ KF    + +  AN+   GL AG+ T+D+N+A+ ++++I+   +W+NCY A+ +   +GGYK SG GR+  K +L HY  +K+
Sbjct:  400 QEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWVNCYHAYPAHAAFGGYKKSGIGRETHKLTLSHYQNIKN 493          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.146e-18
Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            + EIFGPV+A+ KF    + +  AN+   GL AG+ T+D+N+A+ ++++I+   +W+NCY A+ +   +GGYK SG GR+  K +L HY  +K+
Sbjct:  400 QEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRMAKNIKAGRVWVNCYHAYPAHAAFGGYKKSGIGRETHKLTLSHYQNIKN 493          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.146e-18
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            K EIFGPV A++KF   ++ IK AN+   GLAA + ++D+N A   + + +    W+NC    D+  P+GGYK SG GR+ G+ +LH+Y  VK+
Sbjct:  398 KEEIFGPVGAVIKFKDGKEVIKQANDSNYGLAAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGRELGEYALHNYTNVKA 491          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.390e-17
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            K EIFGPV+A++KF   E+ I+  NN   GLAAG+ T ++  A  VS ++    +W+NCY       P+GGYK SG GR+ G   L +Y Q K+
Sbjct:  399 KEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKA 492          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.390e-17
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            + EIFGPVM+++ +   E+ I+ AN+ + GLAAG++T+DLN A+ V   ++  I WIN +     + P GGYK SG GR+ G  +L HY Q+KS
Sbjct:  385 REEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKS 478          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.390e-17
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = -3
Query:   31 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 312
            + EIFGPVM+++ +   E+ I+ AN+ + GLAAG++T+DLN A+ V   ++  I WIN +     + P GGYK SG GR+ G  +L HY Q+KS
Sbjct:  385 REEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKS 478          
The following BLAST results are available for this feature:
BLAST of CN181497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
AL1A3_RAT1.641e-1844.21Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
BETB_CHRSD2.144e-1847.87Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
ALDH4_BACSU2.800e-1841.05Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
AL1A3_HUMAN4.776e-1844.21Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH_VIBCH8.146e-1840.43Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC38.146e-1840.43Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
ALDH_AGABI8.146e-1842.55Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
YF19_SCHPO1.390e-1743.62Putative aldehyde dehydrogenase-like protein C9E9.... [more]
BETB_YERPY1.390e-1744.68Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPS1.390e-1744.68Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181497 ID=CN181497; Name=CN181497; organism=Citrus sinensis; type=EST; length=317bp
CCTTTTCTCAAAAAAAATGGGAGCCATTTTGGACTTGACCTGCAGATAGT
GATGTAGAGATTTTTTTCCACAGTCTCGACCAAATCCACTCATCTTGTAT
CCTCCGTAAGGGCAGTCGCTGTCAAAAGCAAAATAACAATTGATCCATAT
AATTTTTTTTCGAATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCT
TTGTCATAATGCCTGCTGCTAGGCCATTTTTTTTATTATTTGCACTCTTA
ATTGTTTTTTCGGCAAAAAAAAATTTCATCAATGCCATCACAGGTCCGAA
AATTTCATTCTTTGCTA
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