CN181495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = -1 Query: 281 AQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 661 AQ LG+ L+K + A L++G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A+V + +W + W++WVGP IG +A + ++ Sbjct: 133 AQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQ 269
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 284 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 607 G A A++ G + + EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A+V + +W +HW++WVGP IG LA I + Sbjct: 162 GSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYH 275
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 281 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 589 + G+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP+IG LA I ++ Sbjct: 173 YTKGDGLGA------EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQ 275
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = -1 Query: 278 AQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 661 AQ G+ L+K G A +++ G A E++ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ WD+HW++WVGP +G A +++ Sbjct: 126 AQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFS-ATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQY 263
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = -1 Query: 308 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 661 AQ+ GS A L+ + G F + ++ E ++TF L++ V A D + ++G +A +A+G V N+L G GASMNPA + GPA++ + WVY GP+ G Sbjct: 137 AQVAGSAAASAALRALFGGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNR--AIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVYIAGPVFG 252
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 281 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 589 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP IG LA I ++ Sbjct: 175 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQ 277
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 47/134 (35.07%), Postives = 67/134 (50.00%), Query Frame = -1 Query: 260 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 661 AQ+ S A LK V + + + S V A E ++TF L++ V A A D + ++G +A IA+G V NIL G G SMNP + GPA+ S ++ + WVY V P +G VY +N S Sbjct: 161 AQVSASICASFALKGVFHPFMSGGVTIPS-VSLGQAFALEFIITFILLFVVTAVATDTR--AVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKLNDS 291
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = -1 Query: 278 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661 AQ G+ A +LK V + SG W+A++ EIV+TF +++ A A D + ++G +A +A+G V + G G SMNPA + PA+ S + W+Y++GP+IG VY + Sbjct: 135 AQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPH-WHALLIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTY 259
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 281 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 589 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W +HW++WVGP IG LA I ++ Sbjct: 178 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQ 280
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = -1 Query: 284 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 661 AQ LG+T A L+ V G A + +A E++ T +V+ A P + +LG + IG ++ +L G G SMNPA S GPA+V+W +++ W+Y P+IG + + Y Sbjct: 129 AQTLGATAATLVGVSVY-GVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQ-NLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTY 252 The following BLAST results are available for this feature:
BLAST of CN181495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181495 ID=CN181495; Name=CN181495; organism=Citrus sinensis; type=EST; length=661bpback to top |