CN181495

Overview
NameCN181495
Unique NameCN181495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:479..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQ LG+     L+K   +   T     A  LS G      V  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++WVGP  G  +A   ++F
Sbjct:  130 AQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQF 267          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -1
Query:  275 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL----DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 595
            SA  L++GV        E+V T  LV+ V   A+    DPK   +  +AP+AIG  V A +     F G S+NPA SFGPA+ S +W  H++YW GP+ GG +AG+ +  F
Sbjct:  142 SATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPK---ISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVFSDTWHRHYIYWFGPICGGIIAGLFWRIF 249          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 52/132 (39.39%), Postives = 68/132 (51.52%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA-IGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQL G+T    LL  VT G   +T     + +      AV  E+V+T  LV  V+A+      G     +P A IG  V    L G  F G SMNPA SFGPA++   +  HW++WVGPL G  LA ++Y F
Sbjct:  103 AQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASM----DGRQTLASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = -1
Query:  278 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 592
            A +L+ G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  156 ANSLADGYNTGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 266          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15
Identity = 50/134 (37.31%), Postives = 67/134 (50.00%), Query Frame = -1
Query:  272 AQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 661
            AQ  G      LL  VT     G   +A + S+ + AW     E ++TF LV   Y  + DP K  +G  A  +IG    A       +    +NPA S GP+ V   WD+HWVYW GPL+GG  +G+VYE+ F
Sbjct:  150 AQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF 277          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQLLG+     LL  +T        A   L++   A  AV  E+ +T  LV  ++ +  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:   92 AQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPST-DKRRGKQLGHPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.583e-15
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = -1
Query:  284 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 661
            AQ  GS +A L L+ +      + F  +       A+V EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GASMNPA S GPALV   + + WVY VGP++G    G VY
Sbjct:  126 AQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVY 249          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.597e-15
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = -1
Query:  278 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 583
            +S G     A+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFGPA++     +WD+ W+YWVGP +G  +A I +++
Sbjct:  163 VSDGYNKGTALGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQY 270          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.597e-15
Identity = 49/138 (35.51%), Postives = 75/138 (54.35%), Query Frame = -1
Query:  260 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 661
            AQL+G+     +L ++  G      A   LS+      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  LA I+Y +     S
Sbjct:   93 AQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILYFYLLFPSS 229          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.466e-14
Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQ LG+T    L+K       N     A  LS G      V  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++     +WD+ W++WVGP +G  +A   ++F
Sbjct:  130 AQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFS-ATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQF 267          
The following BLAST results are available for this feature:
BLAST of CN181495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PIP25_ARATH3.859e-1536.69Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
AQPB_DICDI3.859e-1540.54Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQP6_MOUSE3.859e-1539.39Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
PIP22_ARATH5.040e-1540.18Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
BIB_DROME5.040e-1537.31Neurogenic protein big brain OS=Drosophila melanog... [more]
AQP2_SHEEP5.040e-1535.11Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
NIP41_ARATH6.583e-1536.51Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE8.597e-1540.37Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
AQP5_MOUSE8.597e-1535.51Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP26_ARATH1.466e-1437.41Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181495 ID=CN181495; Name=CN181495; organism=Citrus sinensis; type=EST; length=661bp
GAGGGGTTAATGAAATAGACATCAAGCCAATTGAAGCGAGAGTAGAAAGA
CAAAGCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCA
GCTCATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAA
AAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTG
CAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAG
CTGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTA
GCCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAG
CTCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGC
TCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAA
TTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCT
GTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAAC
GACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGG
TCTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCA
AGAAGCTGGGC
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