CN181493

Overview
NameCN181493
Unique NameCN181493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:814..1451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36
Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = -2
Query:  251 YPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 631
            Y TP+C + C +K +  +   KH   S+Y + +D + I  EI K GPVE SFTVYEDF +YKSG+YKHITG+ +GGHA+++IGWG  ++   YW++AN WN  WG +GYF+I RG +EC IE +V+AG
Sbjct:  211 YNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGV-ENKTPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVIAG 337          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36
Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = -2
Query:  218 YPTPKCVRKCVKK--NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 631
            YPTPKC +KCV    ++ +   K +  SAY +  D E I  E+  +GP+E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGIE  VV G+P   +L   +
Sbjct:  228 YPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKLNSLTSRL 366          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.349e-36
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = -2
Query:  230 PTPKCVRKC---VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 628
            PTP C RKC   V+K  ++R  K Y   AY +    + I +EI KNGPV  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  210 PTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILKNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.847e-35
Identity = 67/130 (51.54%), Postives = 85/130 (65.38%), Query Frame = -2
Query:  251 PAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 637
            P   TP C   C    +  +   KH+ +SAY +  +   I AEIY NGPVE +F+VYEDF  YKSGVYKH  G  +GGHA+K+IGWGT + G  YW++AN W  +WG  G+FKI RG ++CGIE  VVAG
Sbjct:  197 PESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGT-ESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAG 325          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.115e-35
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = -2
Query:  230 PTPKCVRKC---VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 628
            PTP C RKC   V+K  ++R  K Y   AY +    + I +EI +NGPV  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RG+N+CGIE  + AG+  +++L
Sbjct:  210 PTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILRNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGIEGTIAAGIVDTESL 342          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.197e-34
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = -2
Query:  194 PAYPTPKCVRKCVK--KNQLWRNSKHYSISAYRINSDPE--DIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEITSADMFED 637
            P   TP C   C    K + ++  KHY  SAY++ +     +I  EIY  GPVE S+ VYEDF HYKSGVY + +G ++GGHAVK+IGWG  ++G DYW++AN W  S+G  G+FKI+RG+NEC IE +VVAG      + K  T ++ +ED
Sbjct:  203 PESTTPSCKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYTSGKLVGGHAVKIIGWGV-ENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQIEGNVVAG------IAKLGTHSETYED 347          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.570e-33
Identity = 60/129 (46.51%), Postives = 86/129 (66.67%), Query Frame = -2
Query:  248 YPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 631
            Y TP+C + C K  +  +   KHY   +Y + ++ + I  +I   GPVE +F VYEDF +YKSG+Y+H+TG ++GGHA+++IGWG  +    YW++AN WN  WG  G F++ RG +EC IE DVVAGL
Sbjct:  212 YKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGV-EKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAGL 339          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.570e-33
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = -2
Query:  248 TPKCVRKCVKKN-QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 625
            TPKC + C +   + ++  KH+  SAYR+ ++ + I  +I KNGPV   F VYEDFAHYKSG+YKH  G + GGHAVK+IGWG  + G  YW++AN W+  WG  G++++ RG N C IEE V AG+
Sbjct:   48 TPKCQKTCQRGYLKAYKEDKHFGKSAYRLPNNVKAIQRDIMKNGPVVAGFIVYEDFAHYKSGIYKHTAGRMTGGHAVKIIGWG-KEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRIEEMVFAGI 173          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.113e-31
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = -2
Query:  251 TPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 625
            TP+C R+C+        S  Y   AY++ +  + I  +I KNGPV  ++TVYEDFAHY+SG+YKH  G   G HAVK+IGWG  + G  YWI+AN W+  WG +G+F++ RGSN+CG EE + AG
Sbjct:  215 TPRCKRRCLLGYPKSYPSDRYYKKAYQLKNSVKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGLHAVKVIGWG-EEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCGFEERMAAG 338          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = -2
Query:  245 TPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 625
            TP C ++C   + L +   KH     Y  +SD E IM EI  NGPVE  FTV+EDF  YKSGVY H TG  +GGH VKL+G+GT  +G DY+   NQW  SWG +G F IKRG  +CGI +DVVAGLP
Sbjct:  188 TPSCTKECQSNSSLIYSQDKHKMAKIYSFDSD-EAIMQEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTL-NGVDYYAANNQWTTSWGDNGTFLIKRG--DCGISDDVVAGLP 311          
The following BLAST results are available for this feature:
BLAST of CN181493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CYSP_SCHMA1.279e-3651.56Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR6_CAEEL1.279e-3650.00Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CYSP2_HAECO6.349e-3650.74Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CPR1_CAEEL1.847e-3551.54Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CYSP1_HAECO4.115e-3549.26Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CPR3_CAEEL1.197e-3447.37Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CYSP_SCHJA6.570e-3346.51Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CYSP3_OSTOS6.570e-3349.61Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CYSP1_OSTOS2.113e-3148.80Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CTSB_DICDI1.789e-3053.91Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181493 ID=CN181493; Name=CN181493; organism=Citrus sinensis; type=EST; length=638bp
GAGGTTTTTTATTACAACTGGTTCTATTTTTACACACAACATTAAACTCC
ATTAATACATTCAATTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGA
TAGCTTAGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAA
TAACAACATGAAGGTATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCA
AACATATCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAA
ACCAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAA
TCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGA
ATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAAC
AGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATT
TGTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCA
TTCTTGTAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATA
TGCACTAATACTGTAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGA
CGCACTTCCTCACACACTTTGGAGTAGGATATGCCGGC
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