CN181489

Overview
NameCN181489
Unique NameCN181489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:607..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21
Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+     WVDV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+SIA F++P   D++  P P L+    EK   + +F   DY+  +   +   K
Sbjct:  168 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGN-RMSIASFYNPGS-DAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEK 302          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20
Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYI 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    EW+DV PV  ++VIN+GD +++++N +Y S+ HRV+A S    R+SIA F++P + D+   P P L+    E    + +F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSD-GTRMSIASFYNPGD-DAFISPAPALLEEKSEVSPTYPKFLFDDYM 285          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 52/138 (37.68%), Postives = 86/138 (62.32%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+S+A F++P+  D++  P P L+   + E    + +F   DY+  +   +   K
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTD-GTRMSLASFYNPAS-DAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAK 297          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.805e-20
Identity = 48/141 (34.04%), Postives = 81/141 (57.45%), Query Frame = -3
Query:   81 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNY 503
            +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP +++++IGD ++I+SN +Y S+ HR + N   + R S A+F  P +   +  P PE ++  +P RF   T   ++     ++ D    V +
Sbjct:  219 NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKE-KVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRKDDKDAAVEH 358          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20
Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYI 497
            YP CP+PDL  G+ +H+D G + +L QDDK  GLQ+    EWVDV P+  ++VIN+GD +++++N +Y SV HRV+A S    R+SIA F++P   DS   P P ++    E    + +F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSD-GTRMSIASFYNPG-NDSFISPAPAVLEKKTEDAPTYPKFVFDDYM 285          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20
Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = -3
Query:  129 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 503
            ++YP CP+PD  +G+ +HTD   LTIL Q++  GLQ+   +  WV V P PG+LV+N+GD+  I+SN  + SV HR   N +   R+S+A  + P + D    P P+L+SP +   ++  T  +Y+
Sbjct:  215 NHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQT-RARLSVAFLWGP-QSDIKISPVPKLVSPVESPLYQSVTWKEYL 338          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20
Identity = 54/137 (39.42%), Postives = 82/137 (59.85%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+P+L  G+ +HTD G L +L QDDK  GL +    +WVDV P+  ++VIN+GD L++++N +Y SV HRV+A      R+SIA F++P   D++  P P L+    EK   + +F   DY+  +   +   K
Sbjct:  163 YPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGN-RMSIASFYNPG-NDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAK 297          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.252e-20
Identity = 50/136 (36.76%), Postives = 85/136 (62.50%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR-FRQFTHTDYITRFFTKQLDGK 497
            YP CP+P+L  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+SIA F++P + D++  P   L+   + +  + +F   DY+  +   +   K
Sbjct:  162 YPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTD-GARMSIASFYNPGD-DAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAK 295          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.252e-20
Identity = 52/137 (37.96%), Postives = 84/137 (61.31%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR--FRQFTHTDYITRFFTKQLDGK 497
            YP CP+ DL  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+SIA F++P   D++  P P L+  E   +  + +F   DY+  +   +   K
Sbjct:  162 YPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTD-GTRMSIASFYNPG-NDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAK 296          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.252e-20
Identity = 52/127 (40.94%), Postives = 81/127 (63.78%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR---FRQFTHTDYI 497
            YP CP+P+L  G+ +HTD G + +L QD+K  GLQ+    EW+DV P+  ++VINIGD L++++N +Y SV HRV+A      R+SIA F++P   D++  P P L+  E+  +   + +F   DY+
Sbjct:  162 YPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGN-RMSIASFYNPGS-DAVMYPAPALVDKEEDQQKQVYPKFVFEDYM 286          
The following BLAST results are available for this feature:
BLAST of CN181489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO_DIACA8.103e-2139.42Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO2_MALDO1.058e-2042.061-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO4_PETHY1.382e-2037.681-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
LDOX_PETHY1.805e-2034.04Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
ACCO1_MALDO2.358e-2042.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
G3OX1_ARATH4.021e-2038.89Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO3_CUCME4.021e-2039.421-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PEA5.252e-2036.761-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_DIOKA5.252e-2037.961-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE5.252e-2040.941-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181489 ID=CN181489; Name=CN181489; organism=Citrus sinensis; type=EST; length=667bp
GAATTGTTATTCTTACGTAAGAATAGTTTATACAGGCACAAACAACCAGA
TTTACCAAGTTTTGTTTCTTACAGCCTATAGTAATTCACCAATGTTTTTC
CATCTAACTGTTTTGTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAAC
TGCCGAAAACGAGCTGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCC
ATAAAGGCTGTCCCTCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTC
GTGGTTCCGGGGACGAATTAGCCAATACTCTATGCTCTACACTTATGTAT
TCATCATTGGACATAATCTGAAGTATATCCCCAATGTTAATAACCAGAGC
TCCTGGAACTGGTTTAACATCCACCCATTCCTCACCATGCTTAATTTGCA
GCCCACCTTTATCATCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTA
TGAGATGTGATCCCCACTGTCAGATCAGGCTGCGGACAGTAGGGATAATA
ATGGCCCACCATCATCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTAT
CGGTTTTCAACCCCAAACCTTCACACAGCAGCCCAAACAAAAGCTCTCCG
AGCTGTTTTACATGGTGGTTCCACTCGACTGCCTCTTTCCTACATATTTC
AGGAACTTCTTCAAGCT
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