CX077104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_LOTJA (Putative membrane protein ycf1 OS=Lotus japonicus GN=ycf1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.057e-26 Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = -2 Query: 2 SIQRGEMSLPILI--TKKKFAL------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGG--RVLDKNKNL 451 SIQRGE+SL I++ +K L KE + G+ IIEP RLS KN+ QFF+Y+ + L+HK+KR+I +R EK +DK+ F + I + Q++T N+ K HY L+V E IL +RRRELR LICFN ++ N M + +F N K +V KNK+L Sbjct: 1579 SIQRGELSLDIMMIQNEKDSTLTGFRKKKEFIEKGIFIIEPVRLSRKNNEQFFMYETARLLLIHKSKRQINQRNPEKSDLDKQIFYKNIPPKRDQRITQNKEKKHYALVVIENILSARRRRELRILICFNPRSINSMPRKTIFDNENKINNCCQVFAKNKDL 1740
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_JASNU (Putative membrane protein ycf1 OS=Jasminum nudiflorum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.057e-26 Identity = 72/178 (40.45%), Postives = 101/178 (56.74%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELT--KGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKG--YVDKKDFDEFIAKHQKMTGN------------------------RNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 S +RGE++ IL T+ + K+L + ++ EP RL KN+GQF +YQ +GI+LVH NK +I R+++K Y K +FDE I H+++T N +KNH DLLVPE I +RRR+LR L C NSKN+N + +NPVF N K + LD+ KNL Sbjct: 1710 SAKRGELAFEILATRPIQSWKKLLLKRKELVFFEPIRLFGKNNGQFIMYQTIGISLVHNNKHEIQPRFRKKKKRYGSKTNFDESIPPHERITRNDERIPTNDEDEKRNKRLRINYERNADKNHLDLLVPENIFSFRRRRKLRILNCLNSKNRNDVDRNPVFCNE-KNSSQDLDREKNL 1886
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.514e-24 Identity = 67/163 (41.10%), Postives = 96/163 (58.90%), Query Frame = -2 Query: 5 SIQRGEMSLPILITKKKFAL----------KELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFI--AKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKN 451 SIQRGE+ L I+I + + L +L K + +IEP RLS KN+ QF + + ++L+HKNKRKI K+Y +K +V+KK F ++I + QK+T K + LVPE IL +RRRELR IC N+N + +N +F N K G +VL K +N Sbjct: 1544 SIQRGELGLDIMIIQNQKNLTLPGLSKNKNNKLRKKELFVIEPVRLSRKNNKQFLKSKTMDLSLIHKNKRKIDKKYLKKIHVNKKSFYKYITRTRDQKITEKNEKEILNFLVPENILSARRRRELRMRICLYPNNRNSIHRNTIFDNENKVKKGFQVLTKKRN 1706
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_LACSA (Putative membrane protein ycf1 OS=Lactuca sativa GN=ycf1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.601e-24 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = -2 Query: 38 IQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICF--NSKNQNGMQKNPVFFNNGK 448 IQR EM L I+ + L +L K G+LI+EP RLS+KNDGQFF+YQI+ I+LVHK+K + +RYQ K + + N +K + DLLVPE IL +RRRELR LI F N KN G+ +N + +N K Sbjct: 1543 IQRKEMDLGIM--SRNLNLTQLMKTGILILEPARLSLKNDGQFFMYQIISISLVHKSKYQSNQRYQ---------------KQENVAKNIDKKNSDLLVPEKILSSRRRRELRILISFNLNLKNNTGVDRNTLVYNENK 1664
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_AMBTC (Putative membrane protein ycf1 OS=Amborella trichopoda GN=ycf1 PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.601e-24 Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK--GGGRVLDKNKNL 451 SIQRGEM L I++ K L +L KGG+ +EP RLS K +GQF +YQ + I+LVHK K++ +RY+E Y+D+ FD FI ++ ++ N + +YDL VPE I +RRRELR L N N N +F N K LD+ K+L Sbjct: 1593 SIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWNGQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNPGKGN---INIIFSNRKKIQNCKPFLDRGKHL 1741
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_RANMC (Putative membrane protein ycf1 OS=Ranunculus macranthus GN=ycf1 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 6.847e-22 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 47 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 451 SIQR EMS+ +++ K +L K +L+IEP RLS+ DG F +YQ + I VH +K + K+ K VD K E +A+H+ + NR+KN+YD L+PE +L +RRRELR IC N +N +N F N Sbjct: 1591 SIQRDEMSMDVMLVPKATTFIKLRKRRLLLIEPARLSINWDGLFIMYQTLVILQVHNSKYQTCKK---KINVDNKGLIESMARHEILFRNRDKNNYDFLIPENLLSSRRRRELRIQICLNLRNFKVGDRNREFSN 1722
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_EPIVI (Putative membrane protein ycf1 OS=Epifagus virginiana GN=ycf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.398e-21 Identity = 58/138 (42.03%), Postives = 82/138 (59.42%), Query Frame = -2 Query: 38 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 451 SI + E++L I+ +K L EL K G+LIIE R S K GQF +YQ +GI+L++KNK++ K+YQ++ Y KK ++LL PE IL +RR++LR LIC NSKN N + NP+F+N K Sbjct: 1552 SIHKREINLDIIPIRKNLILTELIKNGVLIIETIRFSRKY-GQFSMYQTIGISLINKNKQQTNKKYQDQIYFSKK------------------KKFNLLFPENILSFRRRKKLRILICLNSKNVNDIDINPIFWNEKK 1670
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_IPOPU (Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.907e-20 Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 47 IQRGEMSLPILI-TKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 448 I+R ++ L ++ +K ++ + K ++++ LSVKN+GQF +YQ +GI+LVHK+K K ++Y++ Q++ R NH+D LV E IL +RRRELR LICFNS N N + N VFFN Sbjct: 1869 IERRKLQLNVMWKSKSNLSILKFFKSIGMVVDRLGLSVKNNGQFLMYQTIGISLVHKSKNKTNQQYRK----------------QRIIRARENNHFDALVLENILSSRRRRELRILICFNSNNWNDVDTNSVFFN 1987
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_CUSRE (Putative membrane protein ycf1 OS=Cuscuta reflexa GN=ycf1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = -2 Query: 53 IQRGEMSLPILITKKK-FALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVF 448 IQR + +L I+ T F + E K L+++P L +K +G+F LYQIVGI+LVHK+K + + Y+++ I MT N NH D+LV E IL + RRE RTLIC N KN NG+ N +F Sbjct: 1563 IQRRKFNLRIMPTMTNLFNVPEFLKMTGLVMDPLPLLIKTNGKFLLYQIVGISLVHKSKHQTNQTYRKR-----------IIIRAGMT-NLENNHLDVLVLENILSSRCRREFRTLICLNYKNWNGVNTNSIF 1683
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_CUSEX (Putative membrane protein ycf1 OS=Cuscuta exaltata GN=ycf1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17 Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = -2 Query: 53 IQRGEMSLPILITKKKFA-LKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVF 448 IQR +++L I+ + + E K L+++P LS+K DG+F LY+IVGI+LVHK+K + K+Y++ + + NH D+LV E IL + RRELRTLICFN KN NG+ +F Sbjct: 1451 IQRRKLNLRIMPSMTNLLNVPEFLKRTGLVMDPLPLSIKTDGKFLLYKIVGISLVHKSKDQTNKKYRKTRIIRAVE----------------NNHLDVLVLENILSSRCRRELRTLICFNYKNWNGVNTTSIF 1567 The following BLAST results are available for this feature:
BLAST of CX077104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077104 ID=CX077104; Name=CX077104; organism=Citrus sinensis; type=EST; length=452bpback to top |