CN188581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 116/237 (48.95%), Postives = 161/237 (67.93%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717 F+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P +PFVP S F GDN++ S WYKG T+++AL+N+ P++PS PLR+P++D Y I GIGTVPVGRVETG +K G V F P G EVKS+EMHHE + +ALPGDN+G+NV+ + D++RG V ++ D+P + A F Q+++ Sbjct: 98 FVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVV 324
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62 Identity = 123/245 (50.20%), Postives = 168/245 (68.57%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVII 717 F+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY + P +PIS +EG+N++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I+ Sbjct: 98 FVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIV 331
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62 Identity = 123/245 (50.20%), Postives = 168/245 (68.57%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVII 717 F+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY + P +PIS +EG+N++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I+ Sbjct: 96 FVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIV 329
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.197e-62 Identity = 119/238 (50.00%), Postives = 165/238 (69.33%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717 FIKNMITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A +FT+Q+++ Sbjct: 98 FIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERTPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVV 328
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.895e-62 Identity = 119/238 (50.00%), Postives = 165/238 (69.33%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717 FIKNMITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A +FT+Q+++ Sbjct: 98 FIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYTITGVGTVPVGRVETGIIKPGDKVVFEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVV 328
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.424e-61 Identity = 122/245 (49.80%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVII 717 F+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L+ +GY + P +PIS +EGDN++++S + WY GPTLL+ALD I EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE LQEA PGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I+ Sbjct: 96 FVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDEKKFKQVAEQVKKLLQMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLLEALDQIPEPPKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIV 329
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.424e-61 Identity = 119/238 (50.00%), Postives = 163/238 (68.49%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717 FIKNMITG SQAD AVL+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NP+ + F+P++ GDN+ ++S N WY GPTL +D P++P+ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P AA+FT+Q+++ Sbjct: 98 FIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVV 328
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.424e-61 Identity = 120/238 (50.42%), Postives = 162/238 (68.07%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717 FIKNMITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ L K +GYNP + FVP++ F GDN +++S + WYKGPTL++ +D N P++P++ PLR+P+QDVY I G+GTVPVGRVETGV+KPG V F P+G++ E+K++E HHE L +A PGDNVGFNV+ V KD+K+G V + + P A FT+Q+++ Sbjct: 98 FIKNMITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPT-VAEEFTAQIVV 328
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.860e-61 Identity = 123/245 (50.20%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVII 717 F+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++++ +V LK +GY + P +PIS +EGDN++++S + WYKGPTL++ALD I EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE LQEA PGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I+ Sbjct: 96 FVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDQKVFEKVKAQVEKLLKMLGY--KDFPVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIV 329
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.429e-61 Identity = 121/245 (49.39%), Postives = 165/245 (67.35%), Query Frame = 1 Query: 7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVII 717 F+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP +P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I+ Sbjct: 96 FVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIGHIIVAINKMDMVD--YDEKKFKQVSEQVKKLLMMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIV 329 The following BLAST results are available for this feature:
BLAST of CN188581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188581 ID=CN188581; Name=CN188581; organism=Citrus sinensis; type=EST; length=719bpback to top |