CN188581

Overview
NameCN188581
Unique NameCN188581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7124 contig Csv1_Contig7124:365..1083. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 354.369 bits (908), Expect = 3.588e-97
Identity = 178/249 (71.49%), Postives = 206/249 (82.73%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS+ARY+EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E S  + W+KG              L+DALD I  P+RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P  L TEVKSVEMHHEAL EA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P R AA+FT+QVI+
Sbjct:   98 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISGWHGDNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 346          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 6.121e-97
Identity = 176/249 (70.68%), Postives = 206/249 (82.73%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS+AR++EI KEVS+Y+KK+GYNP  V FVPISG+ GDNM+E S  + W+KG             TLL+ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  LTTEVKSVEMHHE+L EA+PGDNVGFN+KNV+VK+++RG+VA +SK+DP + AA+F +QVII
Sbjct:   98 FIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKKIGYNPAAVAFVPISGWHGDNMLEASDKMSWFKGWKIERKDGNASGTTLLEALDAILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLPEAVPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKAAASFNAQVII 346          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 6.121e-97
Identity = 176/249 (70.68%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY------------KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCAVLII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T   +S+AR++EIVKE S+++KKVG+NP+ VPFVP+SGF+GDNMIE +TN+ WY            KG TLL+A+D+I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHE+L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII
Sbjct:   98 FIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVII 344          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.994e-97
Identity = 176/249 (70.68%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  K+S+AR++EI+KE S+++KKVGYNP+ V FVPISGF GDNM+E STN  WYKG             TLL+A+D+I  PKRP+DKPLRLPLQDVYKIGGIGTVPVGR+ETG+LKPGMVVTF PS +TTEVKSVEMHHE L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI+
Sbjct:   99 FIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--KWSEARFNEIIKETSNFIKKVGYNPKTVAFVPISGFNGDNMLEASTNCPWYKGWEKEVKGGKATGKTLLEAIDSIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMVVTFAPSNVTTEVKSVEMHHEQLSEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIV 345          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.994e-97
Identity = 176/249 (70.68%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  K+S+AR++EI+KE S+++KKVGYNP+ V FVPISGF GDNM+E STN  WYKG             TLL+A+D+I  PKRP+DKPLRLPLQDVYKIGGIGTVPVGR+ETG+LKPGMVVTF PS +TTEVKSVEMHHE L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI+
Sbjct:   99 FIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--KWSEARFNEIIKETSNFIKKVGYNPKTVAFVPISGFNGDNMLEASTNCPWYKGWEKEVKGGKATGKTLLEAIDSIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIV 345          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.994e-97
Identity = 175/249 (70.28%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY------------KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T   +S+AR++EIVKE S+++KKVG+NP+ VPFVP+SGF+GDNMIE +TN+ WY            KG TLL+A+D+I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHE+L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII
Sbjct:   98 FIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVII 344          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.044e-96
Identity = 174/249 (69.88%), Postives = 208/249 (83.53%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG              L++ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI+
Sbjct:   84 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVERKEGKAEGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 332          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.044e-96
Identity = 175/249 (70.28%), Postives = 208/249 (83.53%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS+ R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG             +L++ALD I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI+
Sbjct:   98 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKSLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 346          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.781e-96
Identity = 176/249 (70.68%), Postives = 206/249 (82.73%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T  ++S+AR++EI+KE  +++KKVGYNP  V FVPISGF GDNM+E STN  WYKG             TLL+A+D I +PKRP+DKPLRLPLQDVYKIGGIGTVPVGR+ETGVLKPGMVVTF PS +TTEVKSVEMHHE L + +PGDNVGFNVKNV+VKD++RG VA +SK+DP   AA+FT+QVI+
Sbjct:   99 FIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--QWSQARFEEIIKETKNFIKKVGYNPATVAFVPISGFNGDNMLEASTNCPWYKGWEKETKAGKSTGKTLLEAIDAIEQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVTTEVKSVEMHHEQLAQGVPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAASFTAQVIV 345          
BLAST of CN188581 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.781e-96
Identity = 178/249 (71.49%), Postives = 205/249 (82.33%), Query Frame = 1
Query:    7 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVII 717
            FIKNMITGTSQADCA+L I   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S+ R++EIVKE S+++KKVGYNP+ V FVPISG+ GDNM+E STN+ WYKG             TLLDA+D I  P RPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNV+VKD++RG VAS+SK+DPA+EAA+F +QVI+
Sbjct:   98 FIKNMITGTSQADCAILTIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--KWSEDRFNEIVKETSTFIKKVGYNPKTVAFVPISGWHGDNMLEESTNMPWYKGWTKETKAGVVKGKTLLDAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIV 344          
The following BLAST results are available for this feature:
BLAST of CN188581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A2_DROME3.588e-9771.49Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_ORYLA6.121e-9770.68Elongation factor 1-alpha OS=Oryzias latipes GN=ee... [more]
EF1A1_SCHPO6.121e-9770.68Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_PODCU7.994e-9770.68Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_PODAN7.994e-9770.68Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A2_SCHPO7.994e-9770.28Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A_SPOFR1.044e-9669.88Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]
EF1A_BOMMO1.044e-9670.28Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1[more]
EF1A_SORMA1.781e-9670.68Elongation factor 1-alpha OS=Sordaria macrospora G... [more]
EF1A_SCHCO1.781e-9671.49Elongation factor 1-alpha OS=Schizophyllum commune... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006F16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188581 ID=CN188581; Name=CN188581; organism=Citrus sinensis; type=EST; length=719bp
AGTGTTTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
TGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
TTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACAACTGAGGTTAAGT
CTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGGTGACAAT
GTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTT
TGTTGCTTCCAACTCGAAGGATGATCCAGCCAGGGAAGCTGCCAACTTCA
CCTCACAGGTCATCATCAT
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