CN181483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_ANGJA (Proliferating cell nuclear antigen OS=Anguilla japonica GN=pcna PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.783e-34 Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 SLQSMDSSHV+LV L LRS+GF+ YRCDRN+++G++LN++SKMLKCAGN+DIITL+A+D +DT L+FE+ Q+K++D+EMKLMD+D E LGIP EY Sbjct: 36 SLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLALGVSLNSMSKMLKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_SARCR (Proliferating cell nuclear antigen OS=Sarcophaga crassipalpis GN=PCNA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.818e-33 Identity = 62/107 (57.94%), Postives = 84/107 (78.50%), Query Frame = 3 Query: 15 TLTARPPAFSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 T LQ+MD+SHV+L +L LRS+GF+ +RCDRNISMGMNL +++K+LKCA NDD +T+KA D +DT T MFESP +K++D+EMKLM++D+EHLGIP +Y Sbjct: 27 TFECSESGIQLQAMDNSHVSLGSLTLRSDGFDKFRCDRNISMGMNLGSMAKILKCANNDDTVTVKAQDNADTVTFMFESPNHEKVSDYEMKLMNLDQEHLGIPETDY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_XENLA (Proliferating cell nuclear antigen OS=Xenopus laevis GN=pcna PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 SLQSMDSSHV+LV L LRS+GF+ YRCDRN S+G+ ++++SK+LKCA +DDIITL+A+D +DT T++FESP Q+K++D+EMKLMD+D E LGIP EY Sbjct: 36 SLQSMDSSHVSLVQLTLRSDGFDTYRCDRNQSIGVKMSSMSKILKCAASDDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMDLDVEQLGIPEQEY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_HAPBU (Proliferating cell nuclear antigen OS=Haplochromis burtoni GN=pcna PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 SLQSMDSSHV+LV L LR +GF+ YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +DT L+FE+ Q+K++D+EMKLMD+D E LGIP EY Sbjct: 36 SLQSMDSSHVSLVQLTLRHDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_DANRE (Proliferating cell nuclear antigen OS=Danio rerio GN=pcna PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 SLQSMDSSHV+LV L LRS+GF+ YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +D L+FE+ Q+K++D+EMKLMD+D E LGIP EY Sbjct: 36 SLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADALALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_DROME (Proliferating cell nuclear antigen OS=Drosophila melanogaster GN=mus209 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 6.907e-33 Identity = 60/107 (56.07%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 15 TLTARPPAFSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 T LQ+MD+SHV+LV+L LRS+GF+ +RCDRN+SMGMNL +++K+LKCA N+D +T+KA D +DT T+MFES Q+K++D+EMKLM++D+EHLGIP ++ Sbjct: 27 TFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDF 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_SCHPO (Proliferating cell nuclear antigen OS=Schizosaccharomyces pombe GN=pcn1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.178e-32 Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 SLQ+MDSSHVALV++L++S+GFE YRCDRNI++G+NLN +SK+L+CA N+D++TLKA+D + L+FES D+I+D+++KLMDID+EHLGIP EY A Sbjct: 36 SLQAMDSSHVALVSMLIKSDGFEPYRCDRNIALGINLNALSKVLRCAQNEDLVTLKAEDTPEVLNLVFESEKNDRISDYDVKLMDIDQEHLGIPDIEYDA 135
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_BOMMO (Proliferating cell nuclear antigen OS=Bombyx mori GN=PCNA PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.902e-31 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 3 Query: 6 TMPTLTARPPAFSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 T T LQ+MD+SHV+LV+L LR++GF+ YRCDRNISMGMNL ++SK+L AG+ D T+KA D +D T +FESP Q+K++D+EMKLM++D EHLGIP EY Sbjct: 24 TQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILIFAGDKDTATIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_STYCL (Proliferating cell nuclear antigen OS=Styela clava GN=PCNA PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.103e-30 Identity = 59/98 (60.20%), Postives = 82/98 (83.67%), Query Frame = 3 Query: 42 SLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEY 335 SLQ+MDSSHV+LV L LR++GFE++RCDRN++MG+N+ +++K++KCAGNDDIITL+A+D +D L+FES DK + +EMKLMD+D E LGIP +Y Sbjct: 36 SLQAMDSSHVSLVQLTLRADGFENFRCDRNLAMGINMTSMAKIMKCAGNDDIITLRAEDNADMLELIFESSKGDKYSQYEMKLMDLDCEQLGIPEQDY 133
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_DICDI (Proliferating cell nuclear antigen OS=Dictyostelium discoideum GN=pcna PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27 Identity = 56/105 (53.33%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 30 PPAFSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKA-DDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 P SLQ+MD +HV L+ L+LR+EGFE Y CDR++S+G++L ++SK+LKCAGNDD +T++A D+ SDT T +FESP D+++DFE+KL+DI E I ++Y A Sbjct: 32 PEGISLQAMDGTHVTLINLVLRNEGFETYNCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLIDIKNEQYSIRKSDYSA 136 The following BLAST results are available for this feature:
BLAST of CN181483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181483 ID=CN181483; Name=CN181483; organism=Citrus sinensis; type=EST; length=341bpback to top |