CN188579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188579 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = -3 Query: 371 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 598 KLF+GGL+ T++ +L+ F +G I E ++ +RE+ KSRGF FVT++S A A M+G+ L+G+ I+V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CN188579 vs. ExPASy Swiss-Prot
Match: RMXL3_PANTR (RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes GN=RBMXL3 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = -3 Query: 377 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 598 KLFVGGL+ TD+ +LK F +G I + +I +R++ KSRGF FVT++S A +A M+G+ L+G+ I V+ Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMVA 82
BLAST of CN188579 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = -3 Query: 362 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 601 T +++ DD LKE F FG KV+T+ ESGKS+GFGFV+++ +E A A M+G+ELNG+ I V A + Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of CN188579 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = -3 Query: 362 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 601 T +++ DD LKE F FG KV+T+ ESGKS+GFGFV+++ +E A A M+G+ELNG+ I V A + Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of CN188579 vs. ExPASy Swiss-Prot
Match: NUCL_MOUSE (Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = -3 Query: 362 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 613 SQ LFV GLS T + +LKE+F A+++T+RE+G S+GFGFV ++S E A +A+ AM+ E++G + + +A + Sbjct: 565 SQPSKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 645 The following BLAST results are available for this feature:
BLAST of CN188579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188579 ID=CN188579; Name=CN188579; organism=Citrus sinensis; type=EST; length=744bpback to top |