CN181477

Overview
NameCN181477
Unique NameCN181477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3890 contig Csv1_Contig3890:239..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 93.2041 bits (230), Expect = 1.179e-18
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = -3
Query:  326 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGK 631
            VL+EFYAPWCGHCK L P   E+      D ++VIAK DATAND+P   +EV+G+PT++F  A+ K  P  YEG R   D + +++    +A     ++EE  K
Sbjct:  397 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQR---EATNPPVIQEEKPK 496          

HSP 2 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 47/139 (33.81%), Postives = 66/139 (47.48%), Query Frame = -3
Query:  230 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE-----SGKDEL*EGMGASLLESRAHSRLARVWRMLYQNYQ 631
            +L+EF+APWCGHCK+LAP  +  A   +    V +AK D TAN    + + V GYPT+       +   Y+G RT + IV  ++     A+     +EE     S KD    G       S AHS   +    L  NY+
Sbjct:   48 MLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSF-SEAHSEFLKAASNLRDNYR 183          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.179e-18
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = -3
Query:  326 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGK 631
            VL+EFYAPWCGHCK L P   E+      D ++VIAK DATAND+P   +EV+G+PT++F  A+ K  P  YEG R   D + +++    +A     ++EE  K
Sbjct:  397 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQR---EATNPPVIQEEKPK 496          

HSP 2 Score: 72.0182 bits (175), Expect = 2.812e-12
Identity = 48/139 (34.53%), Postives = 67/139 (48.20%), Query Frame = -3
Query:  230 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE-----SGKDEL*EGMGASLLESRAHSRLARVWRMLYQNYQ 631
            +L+EF+APWCGHCK+LAP  +  A   +    V +AK D TAN    + + V GYPT+       +   Y+G RT + IV  ++     A+     +EE     S KD    G    L  S AHS   +    L  NY+
Sbjct:   48 MLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASVVGFFDDLF-SEAHSEFLKAASNLRDNYR 183          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA4_BOVIN (Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -3
Query:  365 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPY---EGDRTKEDIVDFIENNRDK 631
            VL+EFYAPWCGHCK+L P+   +   Y+   ++VIAK DATAND+  D ++V+G+PT++F  +  K  P    +G+R  E +  FIE +  K
Sbjct:  544 VLIEFYAPWCGHCKQLEPVYTSLGKKYKGHKNLVIAKMDATANDVTSDRYKVEGFPTIYFAPSGDKKKPIKFEDGNRDLEHLSKFIEEHATK 635          

HSP 2 Score: 84.3445 bits (207), Expect = 5.476e-16
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = -3
Query:  392 VLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIV 631
            VLLEFYAPWCGHCK+ AP  +++A +  +ND  + +AK DAT+       F+V GYPT+      G+ V YEG RT+E+IV
Sbjct:   81 VLLEFYAPWCGHCKQFAPEYEKIAATLKENDPPIPVAKIDATSESALASRFDVSGYPTIKILK-KGQEVDYEGSRTQEEIV 160          

HSP 3 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = -3
Query:  383 VLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 631
            +L+EFYAPWCGHCKKLAP  ++ A    ++   + +AK DA A       F+V  YPT+  FR   GK   Y G R K  IVD++
Sbjct:  196 ILVEFYAPWCGHCKKLAPEYEKAAKELSKSSPPIPLAKVDAIAETDLAKRFDVSSYPTLKIFR--KGKAFSYNGPREKYGIVDYM 278          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = -3
Query:  335 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEE 631
            VL+EFYAPWCGHCK L P   E+      D ++VIAK DATAND+P   +EV+G+PT++F  A  K  P  YEG R   ++ DFI   + +A     ++EE
Sbjct:  395 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP-SPYEVRGFPTIYFAPAGKKQSPKKYEGGR---EVSDFISYLKREATSTPVLQEE 491          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDI_ASPNG (Protein disulfide-isomerase OS=Aspergillus niger GN=pdiA PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17
Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = -3
Query:  374 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD----VVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENN 631
            VLLEFYAPWCGHCK LAP  DE+A  Y +  D    V IAK DATAND+P     + G+PT+    A  K  P  Y G RT ED+ +F++ N
Sbjct:  380 VLLEFYAPWCGHCKALAPKYDELAALYADHPDLAAKVTIAKIDATANDVPD---PITGFPTLRLYPAGAKDSPIEYSGSRTVEDLANFVKEN 468          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA1_CHICK (Protein disulfide-isomerase OS=Gallus gallus GN=P4HB PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.903e-17
Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = -3
Query:  320 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDE 631
            V +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  ++  +PT+ FF + SG+ V  Y G+RT E    F+E+     A  +   E+   DE
Sbjct:  393 VFVEFYAPWCGHCKQLAPIWDKLGETYRDHENIVIAKMDSTANEV--EAVKIHSFPTLKFFPAGSGRNVIDYNGERTLEGFKKFLESGGQDGAAADDDLEDLETDE 496          

HSP 2 Score: 68.9366 bits (167), Expect = 2.381e-11
Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = -3
Query:  359 VLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAA 631
            +L+EFYAPWCGHCK LAP   + A   + + +++ +AK DAT        F V+GYPT+ F     K  P  Y   R  +DIV +++     AA
Sbjct:   49 LLVEFYAPWCGHCKALAPEYAKAAAQLKAEGSEIRLAKVDATEEAELAQQFGVRGYPTIKFFRNGDKAAPREYTAGREADDIVSWLKKRTGPAA 142          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17
Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = -3
Query:  320 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN----RDKAAPKETVKEESGKDE 631
            +L+ F+APWCGHCK  AP  D++A  + +  D+++A+ DATAN +   TF V  +PTVFF    GK V +EG+R+ E++ +F+  +    +    P    +E+  ++E
Sbjct:  369 MLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGKPVVFEGERSFENVYEFVRKHVTTFKVSEKPANVTEEKKSEEE 475          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17
Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -3
Query:  335 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAAPKETVKEE 631
            V +EFYAPWCGHCK+LAPI D++  +Y+   D+VIAK D+TAN++  +  +V  +PT+ FF +  G+TV  Y G+RT +    F+E+     A  E   E+
Sbjct:  389 VFVEFYAPWCGHCKQLAPIWDKLGETYKEHQDIVIAKMDSTANEV--EAVKVHSFPTLKFFPAGPGRTVIDYNGERTLDGFKKFLESGGQDGAGDEDGLED 487          

HSP 2 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 39/117 (33.33%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  290 VLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSA-SGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL*EGMGASLL 631
            +L+EFYAPWCGHCK LAP   + A   + + +D+ +AK DAT        + V+GYPT+ FF++  +     Y   R  +DIV++++     AA   T+ + +  + L E    +++
Sbjct:   45 LLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSDIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAA--TTLADSAAAESLVESSEVAVI 159          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDI2_DICDI (Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.441e-16
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = -3
Query:  359 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAA 631
            VL+EFYAPWCGHCK LAPI D++    ++   V I K DA +ND+P D  E++GYPT+    A  K  P   +  + D ++F+E  +D AA
Sbjct:  397 VLVEFYAPWCGHCKNLAPIYDKLGEYLKDVESVSIVKIDADSNDVPSD-IEIRGYPTIMLFKADDKENPISYEGQRNDHMNFVEFIQDNAA 486          

HSP 2 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = -3
Query:  380 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT-VFFRSASGKTVPYEGDRTKEDIVDFIE 628
            L+ FYAPWCGHCK L P+ +E A     +  + IAK D T ++      +VQGYPT V F+  +GK  PYEGDRT + IV  +E
Sbjct:   62 LVMFYAPWCGHCKTLKPLYEEAAKQLSANKKIAIAKVDCTQHEQLCKQNKVQGYPTLVVFK--NGKAEPYEGDRTTKSIVQTLE 143          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = -3
Query:  335 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 631
            V ++FYAPWCGHCK+L P+ DE+A  Y+++ +VVIAK DAT N++     +V  +PT+  + + S   V Y+GDR  E   +F+      A+  ET  ++
Sbjct:  384 VFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELA--DVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQD 481          

HSP 2 Score: 81.6481 bits (200), Expect = 3.549e-15
Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = -3
Query:  338 VLLEFYAPWCGHCKKLAPILDEVA-VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKE 631
            VL++FYAPWC HCK LAP  DE A +  +  +D+ +AK DAT N      FEV+GYPT+ +   SGK   Y G R    IVD++   + K+ P  T  E
Sbjct:   43 VLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY-FKSGKPTKYTGGRATAQIVDWV---KKKSGPTVTTVE 137          
The following BLAST results are available for this feature:
BLAST of CN181477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PDIA3_HUMAN1.179e-1844.23Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
PDIA3_CERAE1.179e-1844.23Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA4_BOVIN1.540e-1844.57Protein disulfide-isomerase A4 OS=Bos taurus GN=PD... [more]
PDIA3_CHICK2.626e-1846.53Protein disulfide-isomerase A3 OS=Gallus gallus GN... [more]
PDI_ASPNG1.702e-1751.09Protein disulfide-isomerase OS=Aspergillus niger G... [more]
PDIA1_CHICK2.903e-1741.51Protein disulfide-isomerase OS=Gallus gallus GN=P4... [more]
BS2_TRYBB3.792e-1737.04Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
PDIA1_RABIT4.953e-1743.56Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDI2_DICDI1.441e-1645.05Protein disulfide-isomerase 2 OS=Dictyostelium dis... [more]
PDI1_CAEEL2.458e-1640.00Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181477 ID=CN181477; Name=CN181477; organism=Citrus sinensis; type=EST; length=633bp
TATCCATTTCGGATTTAACACGCAGTAAGTTACTCCTAGGCGCCGAAAAT
ACTAAAATATCACAACTATGCGAATACCAAAAAGTACTGCAGCTACAAAT
GCCGAAAATGCCTCCCCATTTTATTCACGGGAACAGAACAGATCTGTAAA
GGGAAATGGCCTAAGAAAAAGCTATAAGGGGGGATATAGGACAAGGGGGA
GGAGAACATCAGGCATTGTTTTGTCGACACTGATAGTTTTGGTATAACAT
CCGCCAAACACGCGCCAACCGACTATGTGCACGGCTCTCTAATAAACTCG
CACCCATTCCTTCTTAGAGCTCATCTTTTCCAGATTCCTCTTTTACAGTT
TCCTTGGGGGCAGCTTTGTCCCTGTTATTTTCAATGAAGTCAACAATATC
TTCTTTGGTCCTATCCCCCTCATAGGGCACTGTCTTTCCACTAGCAGATC
GGAAGAACACGGTTGGGTAACCTTGGACTTCAAAAGTGTCACCAGGAATA
TCATTTGCGGTTGCATCAAATTTTGCAATAACAACATCAGCATCGTTTTG
ATATGAGACAGCAACTTCATCCAAGATTGGAGCCAACTTTTTGCAGTGTC
CACACCAAGGAGCGTAAAACTCGAGCAAAACAT
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