CN188577

Overview
NameCN188577
Unique NameCN188577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN188577_ssr637 microsatellite CN188577_ssr637:637..648. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig209 contig Csv1_Contig209:96..931. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.803e-31
Identity = 87/223 (39.01%), Postives = 118/223 (52.91%), Query Frame = -2
Query:  191 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTR----PVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGS---MFTSRYSARHIMEKIEGVAK-GMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWT 835
            NMYRK+++ +F  P W+S+DA+RL++KLL  +P  RITI+ +M  PWF+K  TR    PVA +IT             E  +   H ++EE     +  NAF  I ++S GFDLS LFE KKK       F +   A  ++  +E  A+ G  F V K  + ++R+ G   GRKG L+               E  K  GDTLEY  FC   +RPALKDI WT
Sbjct:  231 NMYRKIYRGDFKCPGWLSSDARRLVTKLLDPNPNTRITIEKVMDSPWFKKQATRSRNEPVAATIT----------TTEEDVDFLVHKSKEE----TETLNAFHII-ALSEGFDLSPLFEEKKKEEKREMRFATSRPASSVISSLEEAARVGNKFDVRK-SESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWT 437          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.094e-29
Identity = 84/231 (36.36%), Postives = 122/231 (52.81%), Query Frame = -2
Query:  152 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK---KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNINKVEGED 835
            ++Y+K+FKAEF  PPW S  AK+LI ++L  +P  RIT   ++   WF+KG+  P   +              + +++N     +EE + +P   NAFE IS+ S G +L +LFE +    K  + FTS+ SA  I+ KIE  A  M F V K  ++K++L G+  GRKG L+               E  KS GDTLE+ KF  +++   LKDIVW    +   K EG D
Sbjct:  239 SLYKKIFKAEFTCPPWFSASAKKLIKRILDPNPATRITFAEVIENEWFKKGYKAPKFENADVSLDDVDAIFDDSGESKNLVVERREEGLKTPVTMNAFELIST-SQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGFDV-KTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKF-YKNLTTGLKDIVWKTIDE--EKEEGTD 464          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.438e-29
Identity = 84/216 (38.89%), Postives = 115/216 (53.24%), Query Frame = -2
Query:  194 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK---KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVW 832
            +Y+++ KAEF  PPW S  AKR+I ++L  +P  RI+I  ++   WF+KG+ +P +F             AA     N +     EK   P   NAFE ISS SS F L NLFE +    K  + FTS+ SA  IM K+E  AK + F V K  ++KI+++GD  GRKG LS               E  K+ GDTLE+ KF  ++    LKD+VW
Sbjct:  228 LYKRICKAEFSCPPWFSQGAKRVIKRILEPNPITRISIAELLEDEWFKKGY-KPPSFDQDDEDITIDDVDAA---FSNSKECLVTEKKEKPVSMNAFELISS-SSEFSLENLFEKQAQLVKKETRFTSQRSASEIMSKMEETAKPLGFNVRK-DNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKF-YKNFSSGLKDVVW 436          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29
Identity = 80/225 (35.56%), Postives = 117/225 (52.00%), Query Frame = -2
Query:  197 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEE-------------KVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIV 832
            MY+K++K EF  P W S+D  RL+++LL ++P+ RITI  IM+  WF+KGF + V F I         +    E + + R +   E              +  P   NAF+ I S SSGFDLS LFE +   G+ F S      I+ K+E +AK ++F V K K++ +RL G  EG KGPL+               E  K  GD  EY +FC +++RP L+ ++
Sbjct:  282 MYKKIYKGEFRCPRWFSSDLVRLLTRLLDTNPDTRITIPEIMKNRWFKKGF-KHVKFYIEDDKLCREDEDEEEEASSSGRSSTVSESDAEFDVKRMGIGSMPRPSSLNAFDII-SFSSGFDLSGLFEEEGGEGTRFVSGAPVSKIISKLEEIAKIVSFTVRK-KEWSLRLEGCREGAKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYEEFCNKELRPELEKLI 503          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.158e-29
Identity = 81/221 (36.65%), Postives = 115/221 (52.04%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKF--FNAFEFISSMSSGFDLSNLF-ENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            MYRK+ KAE+  P   S + K L+  +L  DP  R++I  I R  W+RK    P+A S   +        +    +      + E     P     NAF+ IS +S+GFDLS LF E   +  S+FTSR  A  ++ K++ +AK +N KV K  +  ++L    EGRKG L                   K++GDTLEY +  +ED+RP+LKDI+WTWQGD
Sbjct:  219 MYRKIAKAEYRCPRHFSAELKELLYGILDPDPSTRMSISRIKRSAWYRK----PIAISALNNETGKKSCTSEAPFSGPTICISSERNQEPPNLHNLNAFDIIS-LSTGFDLSGLFGERYGRRESLFTSRKPAAAVLVKLKELAKALNLKVTKTDNGVLKLATTKEGRKGRLELDAEVSEVAPFLLVE-LKKTNGDTLEYQRMMKEDIRPSLKDIIWTWQGD 433          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.580e-28
Identity = 83/220 (37.73%), Postives = 119/220 (54.09%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK--KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            +Y+K+ +A+F  P W ST AK+LI+++L  +P  RITI  I+  PWF+KG+  PV     ++        AA   +E DRH  +EE    P   NAFE I S++   +L NLFE KK  K  + FTS+   + I+ KIE  AK + F + K K++K+R+     GRKG L+               E  K+ GDTLE+ KF    +   LKD+VW   G+
Sbjct:  229 LYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDE--KYETSFDDVDAAFGDSE-DRH-VKEETEDQPTSMNAFELI-SLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQK-KNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKF-YRTLSTQLKDVVWKCDGE 441          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.695e-28
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK-KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            MYRK+ +A+F  P + S + K LI K+L SDP  RI+I  I R  W+RK        S            A T  +     + + +   S    NAF+ IS +S+GF+LS  FE+        FT+R     ++ K++ +AK +  KV K  +  +RL    EG+KG L                E  K++GDT+EY K  +ED+RPALKDIVW WQGD
Sbjct:  221 MYRKICRADFRCPRYFSAELKDLIHKILDSDPSTRISIPRIKRSTWYRKPVEINAKNSEAATTNSISSGVATTSGSAECSTSEENQGSLSLPNLNAFDIIS-LSTGFNLSGFFEDTHGHQEERFTTRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGD 438          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.520e-28
Identity = 80/215 (37.21%), Postives = 117/215 (54.42%), Query Frame = -2
Query:  194 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK--KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVW 832
            +Y+K+  AEF +PPW S  AKRL++++L  +P  R+TI  I+   WF+KG+ RP      +       D  A      + H    EK   P+  NAFE I SMS+G +L NLF++++  K  + FTS+   + I+ KIE  AK + F V K K++K+RL     GRKG L+               E  K+ GDTLE+ KF  +++   LKD+VW
Sbjct:  222 LYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRP---EFDEKYDTTLDDVYAVFNDSEEHH--VTEKKEEPEALNAFELI-SMSAGLNLGNLFDSEQEFKRETRFTSKCPPKEIVRKIEEAAKPLGFDVQK-KNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKF-YKNLSRTLKDVVW 428          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.598e-28
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK-KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            MYRK+   EF  P W S   ++L+ K++  +P  RI+IQ I    WFRKG                  + A        ++ +++ K  S    NAFE I S S GFDLS +F  K+ +  + FTS  SA  I+ K+E VAK +N +V K  +  ++++G  EGR G L                E  ++SGD+LEY +  EE +RPALKDIV  W GD
Sbjct:  221 MYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVALVLGVRRKKNAHEDVKPMSVTNLNAFEII-SFSKGFDLSGMFIVKEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLAWHGD 438          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.747e-27
Identity = 77/218 (35.32%), Postives = 115/218 (52.75%), Query Frame = -2
Query:  194 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKK----KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVW 835
            ++Y+K+FKA+F  P W ST AK+LI K+L  +P  RITI  ++   WF+KG+ +P  F             +   ++ +      E +   P   NAFE IS+ S G +L  LFE +     K  + F SR  A  I+ KIE  A  M F V K +++K++L+G++ GRKG L+               E  KS+GDTLE+ KF   ++   LKD++W
Sbjct:  221 SLYKKIFKADFSCPSWFSTSAKKLIKKILDPNPSTRITIAELINNEWFKKGY-QPPRFETAD--VNLDDINSIFNESGDQTQLVVERREERPSVMNAFELIST-SQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQK-RNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKF-YHNISNGLKDVMW 432          
The following BLAST results are available for this feature:
BLAST of CN188577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CIPK6_ARATH5.803e-3139.01CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKN_ARATH1.094e-2936.36CBL-interacting serine/threonine-protein kinase 23... [more]
CIPK9_ARATH2.438e-2938.89CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKI_ARATH3.184e-2935.56CBL-interacting serine/threonine-protein kinase 18... [more]
CIPKS_ORYSJ4.158e-2936.65CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKV_ORYSJ1.580e-2837.73CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPKB_ORYSJ2.695e-2836.07CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKW_ORYSJ3.520e-2837.21CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKE_ORYSJ4.598e-2836.07CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKN_ORYSJ1.747e-2735.32CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006F12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188577 ID=CN188577; Name=CN188577; organism=Citrus sinensis; type=EST; length=836bp
TAGTAGCCAACCCAAATATAGTATTTACATGTGTTCCGAAACCATTAAAC
CAAAAAACAAAATGTCAAAAATTTGCAAGTAAAATTAAAACCCTGGCCTG
TAGTTAAAATTAATTTAGTTGGTAGGCAGCATTTGAGAGTTGCATTTCAC
AATCTTCACCCTCGACTTTGTTAATATTGTCACCTTGCCATGTCCAGACG
ATGTCTTTCAATGCAGGCCTAACATCTTCTTCGCAAAACTTTGCATACTC
CAAGGTATCACCGGACGACTTCGAAAACTCGACGACCGCCACCTCCGGCG
CCACCTCGAACACCTCCGCAATCACCGACAGGGGCCCTTTTCGCCCCTCG
GAATCCCCGCGTAACCTAATTTTAAAATCCTTGACTTTTGCCACCTTAAA
GTTCATCCCCTTGGCAACCCCCTCAATCTTTTCCATTATATGCCTGGCCG
AATACCTTGACGTGAACATGGACCCCGTTTTCTTCTTGTTCTCAAACAAA
TTGGACAAATCGAACCCCGACGACATGGATGAGATGAACTCAAACGCGTT
AAAAAACTTGGGAGACGATACTTTCTCTTCCTGATTATTATGACGATCGT
TCTCCGTTTTTTCTGTCGCCGCTTGATCGTCGTCGCCATCATCATCATGT
TGAGTAATGGAAAACGCGACGGGTCTAGTGAACCCTTTGCGGAACCAAGG
GACGCGCATGATGGATTGAATGGTGATTCGCCTCTCGGGATCGGAGACGA
GAAGCTTGGAAATCAAACGCTTGGCATCCGTGGAAATCCAAGGAGGATAA
ACGAACTCAGCCTTGAAAACTTTCCTATACATGTTC
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