CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAA (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pdxS PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.374e-86 Identity = 153/191 (80.10%), Postives = 179/191 (93.72%), Query Frame = 3 Query: 105 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAVRH R+V +IR L++M++DE+FT+AK+I APY Sbjct: 2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPY 192
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_ROSCS (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pdxS PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.662e-85 Identity = 153/190 (80.53%), Postives = 175/190 (92.11%), Query Frame = 3 Query: 108 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI IK++VTIPVMAKARIGHFVEAQ+LEA+GIDY+DESEVLTPADEE+HINKH FRIPFVCGCRNLGE LRR+ EGAAM+RTKGEAGTGN++EAVRH R+V +IR L+ MD+DE+FT+AK I APY Sbjct: 3 KSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKEAVTIPVMAKARIGHFVEAQVLEALGIDYIDESEVLTPADEEHHINKHKFRIPFVCGCRNLGEGLRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQTMDEDELFTYAKNIQAPY 192
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_HERA2 (Pyridoxal biosynthesis lyase pdxS OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pdxS PE=3 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80 Identity = 144/189 (76.19%), Postives = 169/189 (89.42%), Query Frame = 3 Query: 111 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 S F+ KVGLAQML+GGVIMDVVTP+QA++AEEAGA AVMALERVPADIR GGVARMSDP++I+ I ++VTIPVMAK+RIGHFVEAQILEAIG+DY+DESEVLTPADEE+H NKHNF++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++ +IR L+ +D DE+F AK + APY Sbjct: 4 STFTTKVGLAQMLKGGVIMDVVTPDQAKIAEEAGAVAVMALERVPADIRKDGGVARMSDPEMIQGIIEAVTIPVMAKSRIGHFVEAQILEAIGVDYIDESEVLTPADEEHHTNKHNFKVPFVCGARNLGEALRRITEGAAMIRTKGEAGTGNVVEAVRHARTMFAEIRRLQTLDPDELFVAAKNLQAPY 192
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX1_DICDI (Probable pyridoxine biosynthesis protein pdx1 OS=Dictyostelium discoideum GN=pdx1 PE=1 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.384e-78 Identity = 141/188 (75.00%), Postives = 166/188 (88.30%), Query Frame = 3 Query: 111 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 SPF +K LAQML+GGVIMDVVTPEQAR+AEEAGACAVMALE++PADIR GGVARMSDP +IKEI +VTIPVMAK RIGHFVEAQIL+ IG+DY+DESEVLT AD ENHI+K F++PFVCGCRNLGEALRRI EGAAMIRTKGEAGTG+++EAVRH R+V +I+ ++NMD E++T+AK+I AP Sbjct: 14 SPFRIKSSLAQMLKGGVIMDVVTPEQARIAEEAGACAVMALEKIPADIRHFGGVARMSDPGMIKEIMNAVTIPVMAKVRIGHFVEAQILQEIGVDYIDESEVLTIADNENHIDKSEFKVPFVCGCRNLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHARAVNKEIKKIQNMDPHELYTYAKEIQAP 201
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 4.847e-77 Identity = 140/189 (74.07%), Postives = 165/189 (87.30%), Query Frame = 3 Query: 108 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 K VK GLAQML+GGVIMDVV EQAR+AE AGACAVMALERVPADIR+QGGVARMSDP +IKEI+ +V+IPVMAK RIGHFVEAQILE+IG+DY+DESEVLTPAD+ NHI K F +PFVCG RNLGEALRRI EGAAMIRTKGEAGTG+++EAVRH R + G++R +++M DE++T+AK+IAAP Sbjct: 6 KGSTQVKAGLAQMLKGGVIMDVVNAEQARIAEAAGACAVMALERVPADIRAQGGVARMSDPSMIKEIQAAVSIPVMAKVRIGHFVEAQILESIGVDYIDESEVLTPADDINHIEKSKFTVPFVCGSRNLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAP 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSC (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain CBDB1) GN=pdxS PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 8.268e-77 Identity = 138/186 (74.19%), Postives = 167/186 (89.78%), Query Frame = 3 Query: 117 FSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 F VK GLAQML+GGVIMDV TPEQA++AEEAGACAVMALERVP+DIR+ GGVARM+DP +I++I + V+IPVMAK RIGHFVEAQILE++G+DY+DESEVLTPADE H+ KH+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M DE+ +AK+I AP Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAP 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSB (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain BAV1) GN=pdxS PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 8.268e-77 Identity = 138/186 (74.19%), Postives = 167/186 (89.78%), Query Frame = 3 Query: 117 FSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 F VK GLAQML+GGVIMDV TPEQA++AEEAGACAVMALERVP+DIR+ GGVARM+DP +I++I + V+IPVMAK RIGHFVEAQILE++G+DY+DESEVLTPADE H+ KH+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M DE+ +AK+I AP Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSPDELSAYAKEINAP 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DEHE1 (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides ethenogenes (strain 195) GN=pdxS PE=3 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.410e-76 Identity = 138/186 (74.19%), Postives = 167/186 (89.78%), Query Frame = 3 Query: 117 FSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 F VK GLAQML+GGVIMDV TPEQA++AEEAGACAVMALERVP+DIR+ GGVARM+DP +I++I + V+IPVMAK RIGHFVEAQILE++G+DY+DESEVLTPADE H+ KH+F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M DE+ +AK+I AP Sbjct: 6 FKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEKIMKVVSIPVMAKCRIGHFVEAQILESMGVDYIDESEVLTPADESFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSADELSAYAKEINAP 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_HELMI (Pyridoxal biosynthesis lyase pdxS OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=pdxS PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.559e-75 Identity = 138/192 (71.88%), Postives = 165/192 (85.94%), Query Frame = 3 Query: 102 TKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 T+ ++VK GLA+ML+GGVIMDV TPEQA++AEEAGACAVMALERVPADIR+ GGVARM+DP +I I +VTIPVMAKARIGHFVEAQ+LE++GIDY+DESEVLTPAD+ HINK++F++PFVCG RNLGEALRRI EGAAMIRTKGE GTGN++EAVRH R VM +IR L + +E +FAK+I APY Sbjct: 3 TETGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTVILRIMDAVTIPVMAKARIGHFVEAQVLESLGIDYIDESEVLTPADDLFHINKNDFKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVRHARQVMSEIRKLTTLPKEERMSFAKEIGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_THET8 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pdxS PE=1 SV=2) HSP 1 Score: 281.952 bits (720), Expect = 2.036e-75 Identity = 135/191 (70.68%), Postives = 166/191 (86.91%), Query Frame = 3 Query: 105 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +K F +K G A+M +GGVIMDV TPEQA +AEEAGA AVMALERVPADIR+QGGVARMSDP++IKEI +V+IPVMAK RIGHFVEA ILEAIG+D++DESEVLTPADEE+HI+K F++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++ +IR ++++ +DE+ +AK+I AP+ Sbjct: 2 EKGTFQIKTGFAEMFKGGVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPF 192 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |