CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_THEVO (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma volcanium GN=pdxS PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.122e-60 Identity = 118/185 (63.78%), Postives = 143/185 (77.30%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +K G + M +GGVIMDV T EQA++AE+AGA AVMALERVPADIR+ GGVARM+DP+ I+EI +VTIPVMAK RIGH EA LE +G+D +DESEVLTPAD H+ K +P V G RNL EA+RRI EGAAM+RTKGEAGTGNIIEAVRH+R V +I ++R M DE+ T A+ IA+ Y Sbjct: 15 IKRGFSSMTKGGVIMDVTTAEQAKIAEKAGAVAVMALERVPADIRAAGGVARMADPKKIREILDAVTIPVMAKVRIGHISEAYTLEKLGVDMLDESEVLTPADPFFHLYKKKLTVPVVSGARNLPEAVRRIFEGAAMVRTKGEAGTGNIIEAVRHIRKVNEEIAIVRRMTQDEIKTAAENIASSY 199
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_THEAC (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma acidophilum GN=pdxS PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.122e-60 Identity = 119/185 (64.32%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +K G + M +GGVIMDV T +QA++AE AGA AVMALERVPADIR+ GGVARM+DP IKEI +V+IPVMAK RIGH EA +LE IG+D +DESEVLTPAD H+ K N +P V G RNL EA+RRI EGAAMIRTKGEAGTGNIIEAVRH+R V +I VL+ M D+++ A I+A Y Sbjct: 15 IKRGFSAMTKGGVIMDVTTADQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPMKIKEIMDAVSIPVMAKVRIGHISEAYVLEKIGVDMLDESEVLTPADPFFHLYKKNLTVPVVSGARNLPEAVRRIFEGAAMIRTKGEAGTGNIIEAVRHIRKVNEEISVLKRMSDEQLRAVASNISASY 199
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULTO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus tokodaii GN=pdxS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.184e-60 Identity = 108/176 (61.36%), Postives = 143/176 (81.25%), Query Frame = 3 Query: 150 RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +GGV+MDV QA +AE+AGA AVM L+++P D+R GGVARM+DP++I+E+ S+TIPVMAK RIGH+ EA+ILEA+G+D +DESEVLTPADEE+HINK F++PFV G RNLGEALRRI EGA+MIRTKGEAGTGN+ EAV+H++ + G+IR L +M +++ A++ PY Sbjct: 58 KGGVVMDVTNVTQAEIAEDAGATAVMVLDKLPYDVRKSGGVARMADPKIIEEVMNSITIPVMAKVRIGHYYEAKILEALGVDMIDESEVLTPADEEHHINKWEFKVPFVNGARNLGEALRRITEGASMIRTKGEAGTGNVSEAVKHMKIINGEIRSLISMSEEDRMKKAREYQVPY 233
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_HALLT (Pyridoxal biosynthesis lyase pdxS OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pdxS PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.199e-59 Identity = 117/194 (60.31%), Postives = 149/194 (76.80%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 + E K+ VK G A+M +GGVIMDVVT EQAR+AE+ GA AVMALE VPADIR +GGVARM DP+ + EI V+IPVM K+RIGH EA+ILE++G+D +DESEVLTPAD+E H +K +F PFVCG R+L EALRRIREGAAMIRTKGEAGTG++ +AV+H R++ IR L ++ +E +A++ AP Sbjct: 7 LEELKRGTDLVKRGFARMQKGGVIMDVVTREQARIAEDTGAVAVMALEAVPADIRKRGGVARMPDPENVTEIIDEVSIPVMGKSRIGHRKEAEILESLGVDMIDESEVLTPADDEYHTDKRDFASPFVCGARDLPEALRRIREGAAMIRTKGEAGTGDVNQAVKHQRTIKTQIRTLTGLNHEEREKWAREHGAP 200
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_NATPD (Pyridoxal biosynthesis lyase pdxS OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=pdxS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 119/194 (61.34%), Postives = 145/194 (74.74%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 + E ++ VK G A+M +GGVIMDVVT EQAR+AE+AGA AVM LE VPADIR +GGVARM+DP ++++ V+IPVM KARIGH EAQILEA G D +DESEVLT AD+ HI+K F PFVCG RNLGEALRRI EGAAMIRTKGEAGTG++ +AV H R++ IR L MD +E +A++ AP Sbjct: 6 LEELRRGTDLVKRGFAKMQKGGVIMDVVTREQARIAEDAGAVAVMHLESVPADIRKRGGVARMADPGGLEDVIDEVSIPVMGKARIGHTAEAQILEATGADMIDESEVLTQADDRYHIDKREFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGDVNQAVTHQRNIQRSIRKLSGMDYEERDEWAREHGAP 199
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULSO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus solfataricus GN=pdxS PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.732e-58 Identity = 105/176 (59.66%), Postives = 142/176 (80.68%), Query Frame = 3 Query: 150 RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +GGV+MD+ +QA++AEEAGA AVM L+++P D+R GGVARM+DP++I+E+ S+TIPVMAK RIGH+ EA++LEA+G+D +DESEVLTPADEE+HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY Sbjct: 60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIEEVMSSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTSEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPY 235
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULIY (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pdxS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 109/202 (53.96%), Postives = 151/202 (74.75%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQML-------RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + E KK +++ G ++ +GGV+MD+ +QA++AEEAGA AVM L+++P D+R GGVARM+DP++I E+ S+TIPVMAK RIGH+ EA++LEA+G+D +DESEVLTPADEE+HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY Sbjct: 34 LPELKKLDSTIQTGTTRVKHAFPIFQKGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPY 235
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULIM (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pdxS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 109/202 (53.96%), Postives = 151/202 (74.75%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQML-------RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + E KK +++ G ++ +GGV+MD+ +QA++AEEAGA AVM L+++P D+R GGVARM+DP++I E+ S+TIPVMAK RIGH+ EA++LEA+G+D +DESEVLTPADEE+HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY Sbjct: 34 LPELKKLDSTIQTGTTRVKHAFPIFQKGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPY 235
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULIL (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pdxS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 109/202 (53.96%), Postives = 151/202 (74.75%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQML-------RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + E KK +++ G ++ +GGV+MD+ +QA++AEEAGA AVM L+++P D+R GGVARM+DP++I E+ S+TIPVMAK RIGH+ EA++LEA+G+D +DESEVLTPADEE+HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY Sbjct: 34 LPELKKLDSTIQTGTTRVKHAFPIFQKGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPY 235
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_SULIK (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pdxS PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 109/202 (53.96%), Postives = 151/202 (74.75%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQML-------RGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + E KK +++ G ++ +GGV+MD+ +QA++AEEAGA AVM L+++P D+R GGVARM+DP++I E+ S+TIPVMAK RIGH+ EA++LEA+G+D +DESEVLTPADEE+HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY Sbjct: 34 LPELKKLDSTIQTGTTRVKHAFPIFQKGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPY 235 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |