CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_THET2 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pdxS PE=3 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.660e-75 Identity = 135/191 (70.68%), Postives = 166/191 (86.91%), Query Frame = 3 Query: 105 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +K F +K G A+M +GGVIMDV TPEQA +AEEAGA AVMALERVPADIR+QGGVARMSDP++IKEI +V+IPVMAK RIGHFVEA ILEAIG+D++DESEVLTPADEE+HI+K F++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++ +IR ++++ +DE+ +AK+I AP+ Sbjct: 2 EKGTFHIKTGFAEMFKGGVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPF 192
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_PARUW (Pyridoxal biosynthesis lyase pdxS OS=Protochlamydia amoebophila (strain UWE25) GN=pdxS PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.011e-74 Identity = 132/197 (67.01%), Postives = 170/197 (86.29%), Query Frame = 3 Query: 87 GAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 G +T+K F +KV LA+ML+GGVIMDV EQA++AE+AGA AVMALER+P+DIR QGG+ARMS+P+LI++I+++V+IPVMAK RIGHFVEAQILE++ +D++DESEVLTPADEENHI+KH F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGN++EAVRH+R++ +IR L MD E+ AK++ AP+ Sbjct: 2 GQFNQTEKGSFEIKVALAEMLKGGVIMDVTNSEQAKIAEDAGAVAVMALERIPSDIRVQGGIARMSNPELIQKIQETVSIPVMAKCRIGHFVEAQILESLQVDFIDESEVLTPADEENHIDKHIFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNVVEAVRHMRAINREIRHLMLMDSSELMAEAKRLGAPF 198
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CORGL (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium glutamicum GN=pdxS PE=1 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.011e-74 Identity = 139/193 (72.02%), Postives = 166/193 (86.01%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 ET ++ VK GLA ML+GGVIMDVVTPEQAR+AE+AGA AVMALERVPADIRSQGGVARMSDP LI+ I +V+IPVMAKARIGHFVEAQ+LEA+G+D++DESEVL+PAD +HINK F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EAVRH+R++ GDI LR++D+DE+F AK+ APY Sbjct: 24 ETYQATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRSQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQVLEALGVDFIDESEVLSPADYTHHINKWKFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVRHLRTIRGDINRLRSLDEDELFVAAKEFQAPY 216
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX1_EMENI (Pyridoxine biosynthesis protein pyroA OS=Emericella nidulans GN=pyroA PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.252e-74 Identity = 141/202 (69.80%), Postives = 168/202 (83.17%), Query Frame = 3 Query: 90 AITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDI----RVLRNMDD--DEVFTFAKKIAAPY 677 A T + F+VK GLAQML+GGVIMDVV EQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP +IKEI ++VTIPVMAKARIGHFVE QILEAIG+DY+DESEVLTPAD H+ KHNF+ PFVCGCRNLGEALRRI EGAAMIRTKGEAGTG+++EAV+H+R+V +I +L++ D E+ +A+++ APY Sbjct: 2 AATNGASNDFTVKAGLAQMLKGGVIMDVVNAEQARIAEEAGAAAVMALERVPADIRAQGGVARMSDPSMIKEIMEAVTIPVMAKARIGHFVECQILEAIGVDYIDESEVLTPADNLYHVTKHNFKAPFVCGCRNLGEALRRISEGAAMIRTKGEAGTGDVVEAVKHMRTVNAEIARARAILQSSPDPEPELRAYARELEAPY 203
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DESDA (Pyridoxal biosynthesis lyase pdxS OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=pdxS PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.117e-73 Identity = 132/184 (71.74%), Postives = 162/184 (88.04%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 +K GLA+ML+GGVIMDV TPEQA++AEEAGACAVMALERVPADIR+ GGVARM+DP ++K+I + TIPVMAKARIGHFVEA+ILE++G+DY+DESEVLTPAD++ HI+K +F +PFVCGCRNLGEALRRI EGAAMIRTKGE GTGN++EAVRH R VM ++R+L + + EV FAK++ AP Sbjct: 8 LKTGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTIVKKIMEVATIPVMAKARIGHFVEARILESMGVDYIDESEVLTPADDKYHIDKRDFTVPFVCGCRNLGEALRRIAEGAAMIRTKGEPGTGNVVEAVRHCRQVMDEVRMLCALPEAEVPNFAKEMGAP 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CORDI (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium diphtheriae GN=pdxS PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.117e-73 Identity = 137/193 (70.98%), Postives = 167/193 (86.53%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 ET + VK GLA ML+GGVIMDVVTPEQAR+AE+AGA AVMALERVPADIR+QGGVARMSDP LI+ I +V+IPVMAKARIGHFVEAQILE++G+D++DESEVL+PAD NHI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EAV+H+R++ G+I LR+MD+D+++ AK+I APY Sbjct: 4 ETFTATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRAQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLSPADYVNHIDKWNFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVKHLRTIRGEINRLRSMDEDQLYVAAKEIQAPY 196
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_NATTJ (Pyridoxal biosynthesis lyase pdxS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pdxS PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.906e-73 Identity = 133/191 (69.63%), Postives = 166/191 (86.91%), Query Frame = 3 Query: 105 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +K +VK G+AQM +GGVIMDV TPEQA++AE+AGA AVMALE+VPADIR+ GGVARM+DP++IK+I +V+IPVMAKARIGHFVEA+ILE +G+DY+DESEVLTPADE HI+K+ F +PFVCG RNLGEALRR+ EGA+M+RTKGEAGTGN++EAVRH+R+VM IR ++N+ DDE+ T AK I APY Sbjct: 4 EKGTETVKKGMAQMQKGGVIMDVTTPEQAKIAEKAGAVAVMALEKVPADIRAGGGVARMADPEVIKKIMDAVSIPVMAKARIGHFVEARILENLGVDYIDESEVLTPADEYYHIDKNKFTVPFVCGARNLGEALRRVGEGASMMRTKGEAGTGNVVEAVRHIRTVMDGIRKVQNLPDDELMTEAKNIGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_FRATW (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=pdxS PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.251e-73 Identity = 133/189 (70.37%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 111 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 S ++K+GLA+ML+GGVIMDVV EQA +A++AGA AVMALERVPADIR GG+ARMSDP+LIKEI V+IPVMAKARIGHFVEAQILE++G+D++DESEVLTPADE NHI+K +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V DI ++N D E+ AK + APY Sbjct: 2 SDINIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPY 190
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_FRATU (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Francisella tularensis GN=pdxS PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.251e-73 Identity = 133/189 (70.37%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 111 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 S ++K+GLA+ML+GGVIMDVV EQA +A++AGA AVMALERVPADIR GG+ARMSDP+LIKEI V+IPVMAKARIGHFVEAQILE++G+D++DESEVLTPADE NHI+K +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V DI ++N D E+ AK + APY Sbjct: 2 SDINIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPY 190
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_FRATT (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis GN=pdxS PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.251e-73 Identity = 133/189 (70.37%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 111 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 S ++K+GLA+ML+GGVIMDVV EQA +A++AGA AVMALERVPADIR GG+ARMSDP+LIKEI V+IPVMAKARIGHFVEAQILE++G+D++DESEVLTPADE NHI+K +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V DI ++N D E+ AK + APY Sbjct: 2 SDINIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKARIGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPY 190 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |