CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DESK1 (Pyridoxal biosynthesis lyase pdxS OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=pdxS PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55 Identity = 108/189 (57.14%), Postives = 140/189 (74.07%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVL----RNMDDDEVFTFAKKIAAPY 677 VK G ML+GGVIMDV PEQA +AEEAGA VM L+++P D+R GGVAR +D ++I+E+ S+TIPV AK RIGH EA++LE +G+D +DESEVLTP DE+ HINK F+ PFV G R+L EALRRI EGA+MIRTKGE GTGN+ EAV+H++ V DI +L RN D + ++ ++K+ PY Sbjct: 44 VKYGFVSMLKGGVIMDVTNPEQAIIAEEAGAVGVMVLDKLPYDVRMAGGVARTADVKVIEEVMSSITIPVSAKCRIGHEFEARVLEEVGVDLIDESEVLTPVDEKAHINKWLFKTPFVNGARSLPEALRRIYEGASMIRTKGEPGTGNVAEAVKHIKIVNRDIYMLNGYYRNGDVEAIWVYSKENRVPY 232
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_PYRCJ (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pdxS PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.895e-55 Identity = 108/186 (58.06%), Postives = 139/186 (74.73%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVF--TFAKKIAAP 674 VK+G MLR GVIMDV EQA+VAEEAGA VM L+++P D+R GGVARM+D ++I+E+ ++TIPV AK RIGHF EA +LE IG+D +DESEVLTP DE++HINK F+ PFV G R L EALRRI EGA+MIR+KGEAGTGN+ EAV+H +++ G +R L DDE + +A++ P Sbjct: 47 VKLGFIAMLRRGVIMDVTNVEQAQVAEEAGAVGVMVLDKLPYDVRKAGGVARMADLKIIEEVMDAITIPVSAKVRIGHFYEAVLLEQIGVDLIDESEVLTPVDEQHHINKWLFKTPFVNGARELCEALRRISEGASMIRSKGEAGTGNVAEAVKHFKAIYGAVRDLTAHRDDEEYLRDYARRCQVP 232
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_PYRAR (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=pdxS PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53 Identity = 107/200 (53.50%), Postives = 142/200 (71.00%), Query Frame = 3 Query: 75 YGNDGAITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 Y +G T K VK G MLR GVIMDV EQA++AEEAGA VM L+++P D+R GGVARM+D ++I+E+ VTIPV AK RIGH+ EA +L+ IG+D +DESEVLTP D+++HINK F +PFV GCR L EALRRI EGA+MIR+KGEAGTGN+ EAV+H +++ I L +++ + +A++ AP Sbjct: 38 YPAEGVAAGTVK----VKAGFPAMLRNGVIMDVTNVEQAQIAEEAGAVGVMVLDKLPYDVRKAGGVARMADLKVIEEVMSHVTIPVSAKVRIGHYYEAFLLQEIGVDLIDESEVLTPVDDQHHINKWLFTVPFVNGCRELCEALRRISEGASMIRSKGEAGTGNVSEAVKHFKALYRAINELAAAEEERLRDYARQCQAP 233
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_HYPBU (Pyridoxal biosynthesis lyase pdxS OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pdxS PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.325e-53 Identity = 104/189 (55.03%), Postives = 138/189 (73.02%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNM----DDDEVFTFAKKIAAPY 677 V+ G ML+GGV+MDV +QA +AE+AGA VM L+++P D+R GGVAR +D +I+ + +++TIPV AK RIGH+ EA++LE IG+D +DESEVLTP DE+ HI K FR+PFV G R+L EALRRI EGA+MIRTKGEAGTGN+ EAVRH+++V DI VLR D + + +AK P+ Sbjct: 44 VRYGFISMLKGGVVMDVTNEQQAEIAEDAGAVGVMVLDKLPYDVRKAGGVARTADLNVIRAVMETITIPVSAKCRIGHYWEAKLLEEIGVDLIDESEVLTPTDEKAHIWKWEFRVPFVNGARSLPEALRRIWEGASMIRTKGEAGTGNVAEAVRHMKAVNRDIAVLRGYYKAGDIEAIRLYAKSNNVPF 232
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CLONO (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Clostridium novyi GN=pdxS PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.625e-48 Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 3 Query: 273 ARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +RMSDP++IKEI +V+IPVMAK RIGH VEAQIL+AIGIDY+DESEVLTPAD+ HINK F +PFVCG RNLGEALRRI EGA MIRTKGEAGTGN+IEAVRH+R++ IR L+ M +E+ AK++ APY Sbjct: 1 SRMSDPKMIKEIIDAVSIPVMAKVRIGHVVEAQILQAIGIDYIDESEVLTPADDLFHINKKEFNVPFVCGARNLGEALRRIGEGACMIRTKGEAGTGNVIEAVRHMRTIQSQIRKLKVMPKEELMIAAKELGAPY 135
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX1_STELP (Probable pyridoxal biosynthesis protein PDX1 (Fragment) OS=Stellaria longipes PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.506e-43 Identity = 91/132 (68.94%), Postives = 105/132 (79.55%), Query Frame = 3 Query: 294 LIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCR----NLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 LIKEIK +VTIPVMAKARIGHFVEAQILE+IG+DYVDESEVLTPADE++HINKHNF+IPFVCG A RR G + TGN++EAVRH+RSVMG+IR+LRNMDDDEVF +AKKI+A Y Sbjct: 1 LIKEIKAAVTIPVMAKARIGHFVEAQILESIGVDYVDESEVLTPADEDHHINKHNFQIPFVCGLSIPRGAPPPAYRRGYAGHDTGPRVRKPSTGNVVEAVRHIRSVMGEIRLLRNMDDDEVFAYAKKISAAY 132
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_METVA (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Methanococcus vannielii GN=pdxS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42 Identity = 82/105 (78.10%), Postives = 94/105 (89.52%), Query Frame = 3 Query: 285 DPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 599 DP +I EIK +V+IPVMAKARIGHFVEAQ+LE+IG+D +DESEVLTPADE NHINK F PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAV+H+R+V Sbjct: 1 DPDMIFEIKDAVSIPVMAKARIGHFVEAQVLESIGVDMIDESEVLTPADEINHINKKAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHMRAV 105
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXL4_ARATH (Probable PDX1-like protein 4 OS=Arabidopsis thaliana GN=PDX1L4 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.592e-25 Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 3 Query: 75 YGNDGAITETK-KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVAR 278 YG +GA+TETK KSPFSVKVGLAQMLRGGVIMDVV EQAR+AEEAGACAVMALERVPADIR+QGGVAR Sbjct: 10 YG-EGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVAR 77 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |