CN188576

Overview
NameCN188576
Unique NameCN188576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAAR (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain MRSA252) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAAN (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain N315) GN=pdxS PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAAM (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdxS PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAAE (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain Newman) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAAC (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain COL) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAA9 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain JH9) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAA8 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain NCTC 8325) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAA3 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain USA300) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAA2 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain JH1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
[Close]
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAA1 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.191e-71
Identity = 128/185 (69.19%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677
            VK G+A+M +GGVIMDVV  EQAR+AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+  +V+IPVMAKARIGH  EA++LEA+G+DY+DESEVLTPADEE H+ K  F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPY 194
The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDXS_STAAR5.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAN5.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAM5.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAE5.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAC5.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAA95.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAA85.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAA35.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAA25.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAA15.191e-7169.19Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bp
GCGGTTCTCTTCCTTCGCAACACTTTTTCCTTCTCGCTGTCGGCGTAATG
GCAGGTACCGGAGTGGTGGCGGTCTACGGTAATGACGGCGCTATAACGGA
GACTAAAAAATCTCCATTCTCCGTTAAAGTCGGTCTAGCTCAGATGCTTC
GAGGCGGCGTTATAATGGACGTCGTTACTCCCGAGCAAGCGCGAGTCGCG
GAAGAGGCTGGTGCGTGCGCCGTCATGGCTCTTGAGCGCGTCCCCGCCGA
TATCCGCTCGCAAGGCGGCGTGGCTCGCATGTCTGACCCGCAACTTATCA
AGGAAATCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATT
GGTCACTTCGTCGAAGCTCAAATTCTCGAAGCTATTGGGATCGATTACGT
CGACGAGAGCGAAGTCTTGACTCCCGCCGACGAAGAGAATCACATCAACA
AGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACTTGGGGGAA
GCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACGAAGGGCGA
GGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCGGTCTGTGA
TGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGGTGTTCACT
TTCGCAAAGAAGATAGCGGCGCCGTAC
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