CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_DEIRA (Pyridoxal biosynthesis lyase pdxS OS=Deinococcus radiodurans GN=pdxS PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.779e-71 Identity = 129/195 (66.15%), Postives = 163/195 (83.59%), Query Frame = 3 Query: 93 ITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 +TE + +K G A+M +GGVIMDVVT +QAR+AE AGA AVMALERVPADIR GGVARMSDP++I+EI +V+IPVMAK RIGH VEAQIL+AIG+D++DESEVLTPADE+ HI K +F++PFVCG +NLGEALRR+ EGA+MIRTKGEAGTGN++EAVRH R+V+GDIR +++ +E+ T A+ + APY Sbjct: 12 MTEQQTGTPQLKQGFAEMFKGGVIMDVVTADQARIAEAAGATAVMALERVPADIRKDGGVARMSDPKMIREIMAAVSIPVMAKVRIGHVVEAQILQAIGVDFIDESEVLTPADEQFHILKRDFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVVEAVRHARAVLGDIRAVQSRPAEELMTVARDLQAPY 206
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBM (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pdxS PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 8.854e-71 Identity = 130/187 (69.52%), Postives = 160/187 (85.56%), Query Frame = 3 Query: 117 FSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + + LAQML+ GVIMDVV PEQA++AEEAGA AVMALERVP+DIR QGGVAR SDP++IKEI +V+IPVMAK RIGHFVEAQILEAIG+DY+DESEVLTPAD+ HINK +F++PFVCG RNLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R++ ++R L+ +E+ T AK++ AP+ Sbjct: 5 YELNKNLAQMLKDGVIMDVVNPEQAKIAEEAGAVAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKVRIGHFVEAQILEAIGVDYIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTISSEMRKLQLTPKEELMTVAKEMGAPF 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_BACLD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pdxS PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 8.854e-71 Identity = 127/185 (68.65%), Postives = 157/185 (84.86%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVPADIR+ GGVARM+DP +++E+ +V+IPVMAKARIGH VEA++LEA+G+DY+DESEVLTPADEE H+NK+ F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V +R + M DDE+ T AK + APY Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEALGVDYIDESEVLTPADEEFHLNKNEFTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVGMSDDELMTEAKNLGAPY 193
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCS2 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium smegmatis GN=pdxS PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.510e-70 Identity = 131/185 (70.81%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAKARIGHFVEAQIL+++G+DYVDESEVLTPAD NHI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R + G+IR L +M +DE++ AK++ APY Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQARIAEAAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTNHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAKELQAPY 202
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_CLOCE (Pyridoxal biosynthesis lyase pdxS OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=pdxS PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.576e-70 Identity = 126/187 (67.38%), Postives = 159/187 (85.03%), Query Frame = 3 Query: 117 FSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 + + LAQML+GGVIMDVV ++A +A++AGA AVMALERVP+DIR GGVARMSDP++IK+I+ +V+IPVMAK RIGHFVEAQ+LEA+ IDY+DESEVLTPADEE HI+KH F++PFVCG +NLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R+V +IR +++ E+ T AK+ APY Sbjct: 5 YQLNKNLAQMLKGGVIMDVVNAKEAEIAQKAGAVAVMALERVPSDIRKAGGVARMSDPKMIKDIQSAVSIPVMAKVRIGHFVEAQVLEALSIDYIDESEVLTPADEEFHIDKHTFKVPFVCGAKNLGEALRRISEGASMIRTKGEAGTGNVVEAVRHMRTVTNEIRKVQSASKQELMTIAKEFGAPY 191
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTU (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAK RIGHFVEAQIL+ +G+DY+DESEVLTPAD +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPY 198
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAK RIGHFVEAQIL+ +G+DY+DESEVLTPAD +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPY 198
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBT (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAK RIGHFVEAQIL+ +G+DY+DESEVLTPAD +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPY 198
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBP (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAK RIGHFVEAQIL+ +G+DY+DESEVLTPAD +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPY 198
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBO (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 130/185 (70.27%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQAR+AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAK RIGHFVEAQIL+ +G+DY+DESEVLTPAD +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY Sbjct: 14 VKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPY 198 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |