CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_LISMO (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 128/193 (66.32%), Postives = 159/193 (82.38%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ ++V+IPVMAKARIGH EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTGNI+EAVRH+R V G IR + M DDE+ AK APY Sbjct: 2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_LISIN (Pyridoxal biosynthesis lyase pdxS OS=Listeria innocua GN=pdxS PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.364e-70 Identity = 128/193 (66.32%), Postives = 159/193 (82.38%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ +V+IPVMAKARIGH EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTGNI+EAVRH+R V G IR + +M DDE+ AK APY Sbjct: 2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIASMTDDELMVAAKNFGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_LISMH (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.394e-70 Identity = 128/193 (66.32%), Postives = 158/193 (81.87%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ +V+IPVMAKARIGH EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTGNI+EAVRH+R V G IR + M DDE+ AK APY Sbjct: 2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_LISMF (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.394e-70 Identity = 128/193 (66.32%), Postives = 158/193 (81.87%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ +V+IPVMAKARIGH EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTGNI+EAVRH+R V G IR + M DDE+ AK APY Sbjct: 2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_LISMC (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.394e-70 Identity = 128/193 (66.32%), Postives = 158/193 (81.87%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM+DP++++E+ +V+IPVMAKARIGH EA++LEA+G+DY+DESEVLTPAD+E H+ K +F +PFVCGCR++GEALRRI EGAAM+RTKGE GTGNI+EAVRH+R V G IR + M DDE+ AK APY Sbjct: 2 EKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_BACA2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyloliquefaciens (strain FZB42) GN=pdxS PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.394e-70 Identity = 126/185 (68.11%), Postives = 157/185 (84.86%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVPADIR+ GGVARM+DP +++E+ +V+IPVMAKARIGH VEA++LEA+G+DY+DESEVLTPADEE H+NK+ + +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V +R + M DDE+ T AK + APY Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSDDELMTEAKNLGAPY 193
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX12_ARATH (Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.394e-70 Identity = 130/198 (65.66%), Postives = 169/198 (85.35%), Query Frame = 3 Query: 90 AITETKKS-PFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 AIT+ KK+ PFSVKVGLAQ+LRGG I++V + QA++AE AGAC+V+ V +RS+GGV RM DP LIKE+K++V++PVMA+AR+GHFVEAQILE++ +DY+DESE+++ AD+++ INKHNFR PF+CGCR+ GEALRRIREGAAMIR +G+ TGNI E V++VRS+MG++RVL NMDDDEVFTFAKKI+APY Sbjct: 21 AITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVI----VSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKISAPY 214
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAES (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdxS PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.739e-70 Identity = 125/185 (67.57%), Postives = 157/185 (84.86%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+ +V+IPVMAKARIGH EA++LE++G+DY+DESEVLTPADEE H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ TFAK + APY Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRRVNSEVSRLTVMNDDEIMTFAKDLGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAEQ (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdxS PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.739e-70 Identity = 125/185 (67.57%), Postives = 157/185 (84.86%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+ +V+IPVMAKARIGH EA++LE++G+DY+DESEVLTPADEE H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ TFAK + APY Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRRVNSEVSRLTVMNDDEIMTFAKDLGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_PROAC (Pyridoxal biosynthesis lyase pdxS OS=Propionibacterium acnes GN=pdxS PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.739e-70 Identity = 129/185 (69.73%), Postives = 160/185 (86.49%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK GLA ML+GGVIMDVVTPEQA++AE+AGACAVMALERVPADIR+QGGVARMSDP LI+ I ++V+IPVMAKARIGHFVEAQ+LE++ +D++DESEVL+PAD NHI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EAVRH+R++ ++ L +M DE++ AK++ APY Sbjct: 19 VKRGLADMLKGGVIMDVVTPEQAKIAEDAGACAVMALERVPADIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLESLRVDFIDESEVLSPADYANHIDKWAFGVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVRHLRTIRAEMARLSSMSPDELYVAAKELQAPY 203 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |