CN188576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCPA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium paratuberculosis GN=pdxS PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.848e-69 Identity = 127/185 (68.65%), Postives = 159/185 (85.95%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQA++AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAKARIGHFVEAQIL+++G+DY+DESEVLTPAD +HI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L ++ +DE++ AK++ APY Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQAKIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIISAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPY 202
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCA1 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium avium (strain 104) GN=pdxS PE=3 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.848e-69 Identity = 127/185 (68.65%), Postives = 159/185 (85.95%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVVTPEQA++AE AGA AVMALERVPADIR+QGGV+RMSDP +I+ I +VTIPVMAKARIGHFVEAQIL+++G+DY+DESEVLTPAD +HI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L ++ +DE++ AK++ APY Sbjct: 18 VKRGMAEMLKGGVIMDVVTPEQAKIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIISAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPY 202
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_OCEIH (Pyridoxal biosynthesis lyase pdxS OS=Oceanobacillus iheyensis GN=pdxS PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 4.858e-69 Identity = 127/193 (65.80%), Postives = 158/193 (81.87%), Query Frame = 3 Query: 99 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 E K VK G+AQM +GGVIMDVV EQA++AE+AGA AVMALERVP+DIR+ GGVARM++P L++EI QSV+IPVMAKARIGH VEA++LE++G+DY+DESEVLTPADE H+NK ++ +PFVCGCR+LGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V + + +M DE+ T AK + APY Sbjct: 2 ERKLGTDRVKRGMAQMQKGGVIMDVVNSEQAKIAEQAGAVAVMALERVPSDIRAAGGVARMANPSLVEEIIQSVSIPVMAKARIGHIVEARVLESLGVDYIDESEVLTPADEVFHLNKSDYTVPFVCGCRDLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHIREVQAQVNKVVHMSKDELMTEAKNLGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_GEOSW (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus sp. (strain WCH70) GN=pdxS PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 4.858e-69 Identity = 130/195 (66.67%), Postives = 162/195 (83.08%), Query Frame = 3 Query: 90 AITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP 674 AIT T + VK G+A+M +GGVIMDVV EQA++AE AGA AVMALERVPADIR+ GGVARM+DP +I+E+ ++V+IPVMAKARIGH+VEA++LEA+G+DY+DESEVLTPADEE HI+K F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V IR + +M +DE+ T AK + AP Sbjct: 2 AITGTDR----VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEASRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVSMSEDELVTEAKNLGAP 192
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_STAS1 (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pdxS PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69 Identity = 124/185 (67.03%), Postives = 155/185 (83.78%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVP+DIR+ GGVARM++P++++E+ +V+IPVMAK RIGH EA++LE++G+DY+DESEVLTPADEE H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ T AK I APY Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKGRIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKDTFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTEAKNIGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLE (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae GN=pdxS PE=3 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69 Identity = 126/185 (68.11%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVV PEQAR+AE +GA AVMALERVP+DIR+QGGV+RMSDP +I+ I +VTIPVMAKARIGHFVEAQIL+++G+DY+DESEVLTPAD +HI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ GDIR L ++ +DE++ AK++ APY Sbjct: 22 VKRGMAEMLKGGVIMDVVIPEQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPY 206
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLB (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae (strain Br4923) GN=pdxS PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69 Identity = 126/185 (68.11%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+ML+GGVIMDVV PEQAR+AE +GA AVMALERVP+DIR+QGGV+RMSDP +I+ I +VTIPVMAKARIGHFVEAQIL+++G+DY+DESEVLTPAD +HI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ GDIR L ++ +DE++ AK++ APY Sbjct: 22 VKRGMAEMLKGGVIMDVVIPEQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPY 206
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_BACHD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus halodurans GN=pdxS PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69 Identity = 126/185 (68.11%), Postives = 154/185 (83.24%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQA++AEEAGA AVMALERVPADIR+ GGVARM+DP +++E+ +V+IPVMAK RIGH VEA++LEA+G+DY+DESEVLTPADE H+NK +F +PFVCG R+LGEA RRI EGA+MIRTKGE GTGNI+EAVRH+R + IR + NM DE+ T AK I APY Sbjct: 9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKCRIGHIVEARVLEALGVDYIDESEVLTPADEVYHLNKRDFTVPFVCGARDLGEAARRIGEGASMIRTKGEPGTGNIVEAVRHMRMMQAQIRKVSNMSTDELMTEAKNIGAPY 193
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDXS_BACWK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus weihenstephanensis (strain KBAB4) GN=pdxS PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.287e-69 Identity = 122/185 (65.95%), Postives = 157/185 (84.86%), Query Frame = 3 Query: 123 VKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY 677 VK G+A+M +GGVIMDVV EQAR+AEEAGA AVMALERVPADIR+ GGV+RM+DP +++E+ +V+IPVMAK RIGH VEA++LE++G+DY+DESEVLTPADE H+NK ++ +PFVCGCR++GEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V +IR + ++ +DE+ T+AK APY Sbjct: 10 VKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPADIRAAGGVSRMADPTIVEEVMGAVSIPVMAKCRIGHLVEARVLESLGVDYIDESEVLTPADEVYHLNKRDYTVPFVCGCRDIGEAARRIAEGAAMLRTKGEPGTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPY 194
BLAST of CN188576 vs. ExPASy Swiss-Prot
Match: PDX1_NEUCR (Probable pyridoxine biosynthesis protein pdx-1 OS=Neurospora crassa GN=pdx-1 PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.082e-68 Identity = 123/172 (71.51%), Postives = 149/172 (86.63%), Query Frame = 3 Query: 96 TETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDI 611 T T F+VK GLAQML+GGVIMDV TP +AR+AEEAGACAVMALER+P+DIR+ GGVARMS+P +IKEI+ +VTIPVMAKARIGH E +ILE +G+DY+DESEVLTPAD+ H+ K F+ PFVCGCRNLGEALRRI+EGAAMIRTKGEAGTG+++EAV+H+R+V +I Sbjct: 6 TTTNGDSFTVKAGLAQMLKGGVIMDVTTPAEARIAEEAGACAVMALERIPSDIRAAGGVARMSNPSMIKEIQAAVTIPVMAKARIGHVTECRILEQLGVDYIDESEVLTPADDTYHVQKDQFKAPFVCGCRNLGEALRRIKEGAAMIRTKGEAGTGDVVEAVKHIRTVNAEI 177 The following BLAST results are available for this feature:
BLAST of CN188576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188576 ID=CN188576; Name=CN188576; organism=Citrus sinensis; type=EST; length=677bpback to top |