CN188575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_SULIA (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.27) GN=pdxS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.221e-30 Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = -2 Query: 241 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGE--AMVGLNLSDHKVE 759 +HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY LV T ++ RLP+V+F A+MM LG D DP +RA+A+V A + PE++ E + E +M+G+++ K E Sbjct: 156 HHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQKMISEQKSMMGIDIKSLKPE 330
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_SULSO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus solfataricus GN=pdxS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.494e-30 Identity = 72/175 (41.14%), Postives = 105/175 (60.00%), Query Frame = -2 Query: 241 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGE--AMVGLNLSDHKVE 759 +HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY +V T ++ RLP+V+F A+MM LG D DP +RA+A+V A + PE++ E + E +M+G+++ K E Sbjct: 156 HHINKWEFSVPFVNGARNLGEALRRTSEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQIVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQKMISEQKSMMGIDIKSLKPE 330
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_SULIN (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pdxS PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.494e-30 Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = -2 Query: 241 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGE--AMVGLNLSDHKVE 759 +HINK F +PFV G RNLGEALRR EGA+MIRTKGEAGTGN+ EAV+H++ + +IR L +M +++ A++ PY LV T ++ RLP+V+F A+MM LG D DP +RA+A+V A + PE++ E + E +M+G+++ K E Sbjct: 156 HHINKWEFSVPFVNGARNLGEALRRTVEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQKMISEQKSMMGIDIKSLKPE 330
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_PYRCJ (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pdxS PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.727e-29 Identity = 74/177 (41.81%), Postives = 104/177 (58.76%), Query Frame = -2 Query: 241 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVF--TFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGE--AMVGLNLSDHKVE 759 +HINK F+ PFV G R L EALRRI EGA+MIR+KGEAGTGN+ EAV+H +++ G +R L DDE + +A++ P ++V T +GR+PV+ F A MM LG D DP +RA+AIV A ++ DPE +AE + E +M+G+++ K E Sbjct: 152 HHINKWLFKTPFVNGARELCEALRRISEGASMIRSKGEAGTGNVAEAVKHFKAIYGAVRDLTAHRDDEEYLRDYARRCQVPLEVVKLTADMGRVPVITFAAGGIATPADAAFMMWLGADGVFVGSGIFKSQDPERRAEAIVLATAYWDDPEAVAEAQKMVSEKASMMGIDIRALKPE 328
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THEVO (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma volcanium GN=pdxS PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.651e-29 Identity = 80/203 (39.41%), Postives = 107/203 (52.71%), Query Frame = -2 Query: 259 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY-------------------------------------DLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 756 H+ K +P V G RNL EA+RRI EGAAM+RTKGEAGTGNIIEAVRH+R V +I ++R M DE+ T A+ IA+ Y D++ Q ++L RLPVV+F A+MM+LG D DP K A++IV AV +Y D +V+A VS GL + M G+++ Sbjct: 121 HLYKKKLTVPVVSGARNLPEAVRRIFEGAAMVRTKGEAGTGNIIEAVRHIRKVNEEIAIVRRMTQDEIKTAAENIASSYFQLRNEASTDLFGQSGKVLYDDVYYGMSREKIVKGISDILRQIRKLNRLPVVNFAAGGVATPADGALMMELGADGVFVGSGIFKSPDPEKMAKSIVEAVENYKDYDVVARVSEGL-QGMPGIDI 322
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THEAC (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma acidophilum GN=pdxS PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27 Identity = 77/203 (37.93%), Postives = 106/203 (52.22%), Query Frame = -2 Query: 259 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY-------------------------------------DLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 756 H+ K N +P V G RNL EA+RRI EGAAMIRTKGEAGTGNIIEAVRH+R V +I VL+ M D+++ A I+A Y ++ Q +++GRLPVV+F A+MM+LG D +P K A++IV AV +Y D +V+ + S GL + M G+++ Sbjct: 121 HLYKKNLTVPVVSGARNLPEAVRRIFEGAAMIRTKGEAGTGNIIEAVRHIRKVNEEISVLKRMSDEQLRAVASNISASYFVLREEASKDLMGVEGKLSYDSAYAGMGRSRIEREILAILRQIRRMGRLPVVNFAAGGVATPADGALMMELGADGVFVGSGIFKSPNPEKMARSIVEAVENYRDYDVVEKASEGL-QGMPGVDI 322
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_PICTO (Pyridoxal biosynthesis lyase pdxS OS=Picrophilus torridus GN=pdxS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.822e-26 Identity = 77/214 (35.98%), Postives = 107/214 (50.00%), Query Frame = -2 Query: 226 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDL-------------------------------------VMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 756 HINK +++P VCG R EA+RRI EGAAMIRTKGEAGTGNIIEA+RH+R V I VL +++ ++ A+ IA+ Y + + + K+ RLPVV+F A+MM++G D DP + A AIV A +Y D + +A+VS GL + M GL + + +ER R Sbjct: 124 HINKKIYKVPVVCGARTFPEAVRRIFEGAAMIRTKGEAGTGNIIEAMRHIRKVNDGINVLLRLNESDMKKVAENIASSYFILRKETSKELFGYDNFPDMDDLYYGMDSDKIINGILKTLKEIKKYRRLPVVNFAAGGVATPSDAALMMKMGLDGVFVGSGIFKSKDPARMASAIVEAAENYEDYKTIADVSSGL-QGMEGLEIDN--IERLQER 334 The following BLAST results are available for this feature:
BLAST of CN188575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188575 ID=CN188575; Name=CN188575; organism=Citrus sinensis; type=EST; length=760bpback to top |