CN188575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_DEIRA (Pyridoxal biosynthesis lyase pdxS OS=Deinococcus radiodurans GN=pdxS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44 Identity = 93/178 (52.25%), Postives = 122/178 (68.54%), Query Frame = -2 Query: 226 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE-RFASR 756 HI K +F++PFVCG +NLGEALRR+ EGA+MIRTKGEAGTGN++EAVRH R+V+GDIR +++ +E+ T A+ + APYDLV G+LPVV+F A+MMQLG D +P +RAQAIVRAVTH+ +P++LAEVS LG M G+N+ + E R ASR Sbjct: 128 HILKRDFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVVEAVRHARAVLGDIRAVQSRPAEELMTVARDLQAPYDLVQYVHAHGQLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSANPERRAQAIVRAVTHFQNPDILAEVSEDLGAPMTGINIDELIPEARLASR 305
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDX1_STELP (Probable pyridoxal biosynthesis protein PDX1 (Fragment) OS=Stellaria longipes PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44 Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = -2 Query: 265 NHINKHNFRIPFVCGCR----NLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGL 759 +HINKHNF+IPFVCG A RR G + TGN++EAVRH+RSVMG+IR+LRNMDDDEVF +AKKI+A YDLVMQTKQLGRLPVV+F A+MMQLGCD GDP KRA+AIV+AVTHYSDP++L GLGEAMVG+ Sbjct: 49 HHINKHNFQIPFVCGLSIPRGAPPPAYRRGYAGHDTGPRVRKPSTGNVVEAVRHIRSVMGEIRLLRNMDDDEVFAYAKKISAAYDLVMQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPDLLGRGEFGLGEAMVGI 217
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_FRAP2 (Pyridoxal biosynthesis lyase pdxS OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pdxS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44 Identity = 94/178 (52.81%), Postives = 117/178 (65.73%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 759 NHI K NF++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V DI ++ D E+ AK + APYDLV + G+LPV +F A+MMQLG + DP+KRA+AIV AVT+Y+DP++LAEVS LGE M G+N E+F+ R Sbjct: 111 NHIAKDNFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKGADQSELMAIAKNMQAPYDLVKYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRAKAIVSAVTYYNDPKILAEVSEDLGEPMTGINCD---FEKFSQR 285
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_CLONO (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Clostridium novyi GN=pdxS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44 Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = -2 Query: 226 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 756 HINK F +PFVCG RNLGEALRRI EGA MIRTKGEAGTGN+IEAVRH+R++ IR L+ M +E+ AK++ APYDLV ++ G+LPV++F A+MMQLGCD +P KRA+AIV AV +Y++P +AEVS GLGEAM GL + V FA R Sbjct: 57 HINKKEFNVPFVCGARNLGEALRRIGEGACMIRTKGEAGTGNVIEAVRHMRTIQSQIRKLKVMPKEELMIAAKELGAPYDLVEYVRENGKLPVINFAAGGIATPADAALMMQLGCDGVFVGSGIFKSENPAKRAKAIVEAVKNYNNPLKIAEVSEGLGEAMTGLEIDKLDV-TFAER 232
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_BACCN (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pdxS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44 Identity = 86/168 (51.19%), Postives = 118/168 (70.24%), Query Frame = -2 Query: 256 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 759 NH+NK ++ +PFVCGCR++GEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V +IR + N+ +DE+ T+AK APY+++++ K+LGRLPVV+F A+MMQLG D +P K A+AIV A THY D E++A +S GLG+AM G+ +S Sbjct: 115 NHLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRQVNAEIRQVANLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAIVEATTHYEDYELIANLSKGLGDAMKGVEIS 282
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_CORGL (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium glutamicum GN=pdxS PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 5.118e-44 Identity = 91/169 (53.85%), Postives = 117/169 (69.23%), Query Frame = -2 Query: 253 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 759 +HINK F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EAVRH+R++ GDI LR++D+DE+F AK+ APYDLV + G+LPVV F A++ Q+G + G+P RA AIV+A T + DP V+A+VS GLGEAMVG+N+SD Sbjct: 137 HHINKWKFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVRHLRTIRGDINRLRSLDEDELFVAAKEFQAPYDLVREVASTGKLPVVTFVAGGVATPADAALVRQMGAEGVFVGSGIFKSGNPAARAAAIVKAATLFDDPSVIADVSRGLGEAMVGINVSD 305
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_CORDI (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium diphtheriae GN=pdxS PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.118e-44 Identity = 90/169 (53.25%), Postives = 118/169 (69.82%), Query Frame = -2 Query: 253 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 759 NHI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EAV+H+R++ G+I LR+MD+D+++ AK+I APYDLV + G+LPV F A++MQ+G + G+P RA AIV+A T Y DP +AEVS GLGEAMVG+N++D Sbjct: 117 NHIDKWNFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVKHLRTIRGEINRLRSMDEDQLYVAAKEIQAPYDLVREVAATGKLPVTLFVAGGVATPADAALVMQMGAEGVFVGSGIFKSGNPAARAAAIVKATTMYDDPAAIAEVSRGLGEAMVGINVAD 285
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBM (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pdxS PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.118e-44 Identity = 91/177 (51.41%), Postives = 123/177 (69.49%), Query Frame = -2 Query: 226 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 756 HINK +F++PFVCG RNLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R++ ++R L+ +E+ T AK++ AP++L+ + GRLPV++F A+MMQLGCD +P KRA+AIV+A T++ DPEVLA+ S LG AM+GL +S + E FA R Sbjct: 113 HINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLIEYVAEKGRLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSDNPEKRAKAIVKATTYFKDPEVLAKASENLGGAMLGLEISKLETE-FAER 288
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_METTH (Pyridoxal biosynthesis lyase pdxS OS=Methanobacterium thermoautotrophicum GN=pdxS PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.685e-44 Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = -2 Query: 253 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 756 HI+K F +PFVCG RNLGEALRRI EGAAMIRTKGE GTGNI+EAVRH+R +M +IR ++N +++E++ ++KI AP +LV +T +LG+LPVV+F A+MMQLG D +P A+AIV A HY DPEV+AEVS GLG AM GL +S+ Sbjct: 114 HIDKKKFTVPFVCGARNLGEALRRIDEGAAMIRTKGEPGTGNIVEAVRHMRIMMSEIREIQNKEEEELWEVSRKIEAPLELVRETAKLGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPEGYARAIVEATAHYDDPEVIAEVSRGLGTAMRGLEISE 281
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THETN (Pyridoxal biosynthesis lyase pdxS OS=Thermoanaerobacter tengcongensis GN=pdxS PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.731e-44 Identity = 89/166 (53.61%), Postives = 116/166 (69.88%), Query Frame = -2 Query: 259 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 756 HINK +F++PFVCG +NLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R + +I+ L + ++E+ AK++ APYDLV Q G+LPVV+F A+MMQLG D +P K A AIV+AVT+Y PE+LAEVS GLGEAM G+++ Sbjct: 113 HINKWDFKVPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVRHMRMINAEIKRLTTLGEEELMAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQNPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDI 278 The following BLAST results are available for this feature:
BLAST of CN188575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188575 ID=CN188575; Name=CN188575; organism=Citrus sinensis; type=EST; length=760bpback to top |