CN188575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCA1 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium avium (strain 104) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.647e-42 Identity = 91/179 (50.84%), Postives = 121/179 (67.60%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD-HKVERFASR 759 +HI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L ++ +DE++ AK++ APY+LV++ + G+LPV F AMMMQLG + GDP +RA AIV+A T Y DP+VLA+VS GLGEAMVG+N+ + ER A R Sbjct: 123 HHIDKWKFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGDPAQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEQIAQPERLAER 301
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_STRAW (Pyridoxal biosynthesis lyase pdxS OS=Streptomyces avermitilis GN=pdxS PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42 Identity = 90/179 (50.28%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD-HKVERFASR 759 NH +K F PFVCG NLGEALRRI EGAAMIR+KGEAGTGN++EAVRH+R + +I LR D++E++ AK++ APY++V + +LG+LPVV F A+M QLG + GDP KRA AIV+A T Y DP+++A+ S LGEAMVG+N + ER+A+R Sbjct: 124 NHSDKWAFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLRQIKNEIARLRGYDNNELYAAAKELRAPYEIVKEVAELGKLPVVLFSAGGVATPADAALMRQLGAEGVFVGSGIFKSGDPAKRAAAIVKATTFYDDPKIIADASRNLGEAMVGINCDTLPEAERYANR 302
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_DESHY (Pyridoxal biosynthesis lyase pdxS OS=Desulfitobacterium hafniense (strain Y51) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42 Identity = 91/165 (55.15%), Postives = 115/165 (69.70%), Query Frame = -2 Query: 262 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLN 756 HI+K F++PFVCG ++LGEALRRI EGAAMIRTKGE GTG+I++AVRH+R + I L M +DE+F AK++ PYDLV+ + RLPVV+F A+MMQLG + GDP KRAQAIV+AVT+Y DP+VLAE+S LGEAMVG+N Sbjct: 114 HIDKTRFKVPFVCGAKDLGEALRRINEGAAMIRTKGEPGTGDIVQAVRHMRMINRQISRLAGMREDELFQEAKELQVPYDLVLYVHEHKRLPVVNFAAGGVATPGDAALMMQLGAEGVFVGSGIFKSGDPEKRAQAIVKAVTNYQDPKVLAELSEDLGEAMVGIN 278
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_DESHD (Pyridoxal biosynthesis lyase pdxS OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42 Identity = 91/165 (55.15%), Postives = 115/165 (69.70%), Query Frame = -2 Query: 262 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLN 756 HI+K F++PFVCG ++LGEALRRI EGAAMIRTKGE GTG+I++AVRH+R + I L M +DE+F AK++ PYDLV+ + RLPVV+F A+MMQLG + GDP KRAQAIV+AVT+Y DP+VLAE+S LGEAMVG+N Sbjct: 114 HIDKTRFKVPFVCGAKDLGEALRRINEGAAMIRTKGEPGTGDIVQAVRHMRMINRQISRLAGMREDELFQEAKELQVPYDLVLYVHEHKRLPVVNFAAGGVATPGDAALMMQLGAEGVFVGSGIFKSGDPEKRAQAIVKAVTNYQDPKVLAELSEDLGEAMVGIN 278
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_BACC2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain G9842) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42 Identity = 83/167 (49.70%), Postives = 116/167 (69.46%), Query Frame = -2 Query: 256 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 756 H+NK ++ +PFVCGCR++GEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V +IR + ++ +DE+ T+AK APY+++++ K+LGRLPVV+F A+MMQLG D +P + A+AIV A THY D E++A +S GLG AM G+ +S Sbjct: 116 HLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRQVNAEIRQVASLREDELMTYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSENPERFARAIVEATTHYEDYELIASLSKGLGNAMKGIEIS 282
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_STAES (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42 Identity = 87/172 (50.58%), Postives = 114/172 (66.28%), Query Frame = -2 Query: 241 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE 756 H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ TFAK + APY+++ Q K GRLPVV+F A+MM+LG D DP K A+AIV+A THY D E++ +++ LG AM GL+++ +E Sbjct: 116 HLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRRVNSEVSRLTVMNDDEIMTFAKDLGAPYEVLKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLE 287
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_STAEQ (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42 Identity = 87/172 (50.58%), Postives = 114/172 (66.28%), Query Frame = -2 Query: 241 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE 756 H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ TFAK + APY+++ Q K GRLPVV+F A+MM+LG D DP K A+AIV+A THY D E++ +++ LG AM GL+++ +E Sbjct: 116 HLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRRVNSEVSRLTVMNDDEIMTFAKDLGAPYEVLKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLE 287
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_STACT (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus carnosus (strain TM300) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42 Identity = 88/172 (51.16%), Postives = 116/172 (67.44%), Query Frame = -2 Query: 241 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE 756 H+ K ++ +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M DDE+ TFAK+I APY+++ K GRLPVV+F A+MMQLG D DP K A+AIV+A THY+D E++ +++ LGEAM GL+++ +E Sbjct: 116 HLLKSDYTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVAKLTVMPDDEIMTFAKEIGAPYEVLKSIKDNGRLPVVNFAAGGVATPQDAALMMQLGADGVFVGSGIFKSEDPEKFAKAIVQATTHYTDYELIGKLAQELGEAMRGLDVNQLSLE 287
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THESQ (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga sp. (strain RQ2) GN=pdxS PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.668e-42 Identity = 85/171 (49.71%), Postives = 118/171 (69.01%), Query Frame = -2 Query: 244 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 756 HINKH F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTGN++EAV+H+R VM I+ + M+D+E+ + K+I AP +L+ + K+LGRLPVV+F A+MM LG D DP K A+A+V AVT++ +P +L ++S +GE M GL++ + +V Sbjct: 116 HINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVKHMRRVMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKRLGRLPVVNFAAGGVATPADAALMMMLGADGVFVGSGIFKSKDPRKMAKAMVLAVTYWDNPRILLKISEDIGEPMRGLDVEELEV 286
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THEMA (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga maritima GN=pdxS PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.668e-42 Identity = 85/171 (49.71%), Postives = 118/171 (69.01%), Query Frame = -2 Query: 244 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 756 HINKH F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTGN++EAV+H+R VM I+ + M+D+E+ + K+I AP +L+ + K+LGRLPVV+F A+MM LG D DP K A+A+V AVT++ +P +L ++S +GE M GL++ + +V Sbjct: 116 HINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVKHMRRVMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKRLGRLPVVNFAAGGVATPADAALMMMLGADGVFVGSGIFKSKDPRKMAKAMVLAVTYWDNPRILLKISEDIGEPMRGLDVEELEV 286 The following BLAST results are available for this feature:
BLAST of CN188575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188575 ID=CN188575; Name=CN188575; organism=Citrus sinensis; type=EST; length=760bpback to top |