CN188575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCS2 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium smegmatis GN=pdxS PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.668e-42 Identity = 88/169 (52.07%), Postives = 116/169 (68.64%), Query Frame = -2 Query: 253 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 759 NHI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R + G+IR L +M +DE++ AK++ APY+LV++ + G+LPV F AMMMQLG + G+P +RA AIV+A T Y DP+VLA+VS GLGEAMVG+N+ + Sbjct: 123 NHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPEQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEE 291
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_LEIXX (Pyridoxal biosynthesis lyase pdxS OS=Leifsonia xyli subsp. xyli GN=pdxS PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.668e-42 Identity = 90/169 (53.25%), Postives = 114/169 (67.46%), Query Frame = -2 Query: 253 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 759 NHI+K +F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ EA +H+R + +I+ L M DE++ AK++ APY+LV + + G LPVV F AMMMQLG D G+P +RA AIVRA T DP V+AEVS GLGEAMVG+N++D Sbjct: 119 NHIDKWDFTVPFVCGATNLGEALRRIIEGAAMIRSKGEAGTGDVSEATKHIRKITAEIKALTAMSRDELYVAAKELQAPYELVAEIAETGTLPVVLFTAGGVATPADAAMMMQLGADGVFVGSGIFKSGNPERRAAAIVRATTFSDDPSVVAEVSRGLGEAMVGINVAD 287
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_STAHJ (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pdxS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.791e-42 Identity = 86/172 (50.00%), Postives = 115/172 (66.86%), Query Frame = -2 Query: 241 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE 756 H+ K F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V ++ L M+DDE+ T+AK++ APY+++ Q K GRLPVV+F A+MM+LG D DP K A+AIV+A THY D E++ +++ LG AM GL+++ +E Sbjct: 116 HLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRKVNSEVSRLVVMNDDEIMTYAKELGAPYEVLKQIKDHGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLE 287
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_THEP1 (Pyridoxal biosynthesis lyase pdxS OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pdxS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.172e-42 Identity = 84/171 (49.12%), Postives = 118/171 (69.01%), Query Frame = -2 Query: 244 HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 756 HINKH F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTGN++EAV+H+R +M I+ + M+D+E+ + K+I AP +L+ + K+LGRLPVV+F A+MM LG D DP K A+A+V AVT++ +P +L ++S +GE M GL++ + +V Sbjct: 116 HINKHEFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVKHMRRMMEQIKQVTKMEDEELVAYGKEIGAPVELLREVKRLGRLPVVNFAAGGVATPADAALMMMLGADGVFVGSGIFKSKDPRKMAKAMVLAVTYWDNPRILLKISEDIGEPMRGLDVEELEV 286
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_NOCFA (Pyridoxal biosynthesis lyase pdxS OS=Nocardia farcinica GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 87/169 (51.48%), Postives = 115/169 (68.05%), Query Frame = -2 Query: 253 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 759 NHI+K F +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R + +IR L + +DE++ AK++ APY+LV + + G+LPVV F AMMMQLG + G+P +RA+AIV+A T Y DP+VLA+VS GLGEAMVG+N+ + Sbjct: 126 NHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRQEIRKLAALPEDELYVAAKELQAPYELVREVAETGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPAQRAEAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEE 294
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTU (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 759 +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY+LV + + G+LPV F AMMMQLG + G P RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ + V R A R Sbjct: 119 HHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 759 +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY+LV + + G+LPV F AMMMQLG + G P RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ + V R A R Sbjct: 119 HHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBT (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 759 +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY+LV + + G+LPV F AMMMQLG + G P RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ + V R A R Sbjct: 119 HHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBP (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 759 +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY+LV + + G+LPV F AMMMQLG + G P RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ + V R A R Sbjct: 119 HHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
BLAST of CN188575 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBO (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis GN=pdxS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41 Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -2 Query: 226 NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXAMMMQLGCDXXXXXXXXXXXGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 759 +HI+K NF +PFVCG NLGEALRRI EGAAMIR+KGEAGTG++ A H+R++ G+IR L +M +DE+F AK++ APY+LV + + G+LPV F AMMMQLG + G P RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ + V R A R Sbjct: 119 HHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297 The following BLAST results are available for this feature:
BLAST of CN188575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188575 ID=CN188575; Name=CN188575; organism=Citrus sinensis; type=EST; length=760bpback to top |