CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.476e-13 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 241 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 609 Y +H S F D L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + + ALVL TRELA QI YL +KV GG +++ + +L Sbjct: 36 YDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.476e-13 Identity = 46/108 (42.59%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F D LK LLR I GFE PS +Q I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI + Y+ +++ GG N+ Sbjct: 27 FDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYM-NVQCHACIGGTNV 133
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 241 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 609 Y +H S F D L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + + ALVL TRELA QI YL +KV GG +++ + +L Sbjct: 36 YDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 47/108 (43.52%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Y+ +++ GG NI Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNI 133
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 47/108 (43.52%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Y+ +++ GG NI Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNI 133
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RHLE_ECOLI (ATP-dependent RNA helicase rhlE OS=Escherichia coli (strain K12) GN=rhlE PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ---TEPNP---GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 L P++LRA+ + G+ P+ +Q + IP + G D++ A++G GKTA F L LQ +P+ V AL+L TRELA QI +S YL +I+ V +GGV+I Sbjct: 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSI 115
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_TAEGU (Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Y+ +++ GG N+ Sbjct: 44 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNV 145
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_RAT (Eukaryotic initiation factor 4A-III OS=Rattus norvegicus GN=Eif4a3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Y+ +++ GG N+ Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNV 146
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_PIG (Eukaryotic initiation factor 4A-III OS=Sus scrofa GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Y+ +++ GG N+ Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNV 146
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Y+ +++ GG N+ Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNV 146 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |