CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKI 594 F LK +LLR I GFE PS +Q I Q I G D I QA+SG GKTA F +S L+ + + A+VL TRELA QI Y+ +++ GG ++ + Sbjct: 26 FESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYM-NVQCHACIGGTSLSV 134
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 244 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Y+ +++ GG N+ Sbjct: 22 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNV 134
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 244 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Y+ +++ GG N+ Sbjct: 23 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNV 135
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 190 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 AP+ TK + A++ F++F L +LR + F +P+ +Q + IP A+LG D++ A +G GKTA FV+ L++ P +V +L TRELA Q + + +TY DI GG +++ +++LK I+ Sbjct: 289 APEEEKTKEQADGAQRS--------FQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATY-TDITFCQLVGGFSLREQENILKKRPDVII 430
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: CSHA_BACSU (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus subtilis GN=cshA PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F+DF L +L++AI GFE + +Q + IP + DVI QA++G GKTA F + +++ P + A+V+ TRELA Q+ E + KV YGG +I Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD-KRAKVLPIYGGQDI 111
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 609 F D L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + + +LVL TRELA QI YL +KV GG +++ + +L Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 615 L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + + + ALVL TRELA QI YL +KV GG +++ + +L++ Sbjct: 47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQS 157
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 259 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 513 S F + LK +LLR I G+E PS VQ I Q G DVI QA+SG GKTA F + LQ + + AL+L TRELA QI Sbjct: 21 SSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQI 105
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RRP3_YARLI (ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica GN=RRP3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F+D + + + F P+ +Q + IP A+ G D+I A++G GKTA F + LQ NP + +VL TRELAYQI FE + + ++ AV GG+N+ Sbjct: 66 FKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENPQPLYCVVLAPTRELAYQISETFEALGSAM-GLRTAVVVGGMNM 172
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RRP3_ASPCL (ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F+D + +L A G++ P+ +Q E IP A+ D+I A++G GKTA F L LQ P LVL TRELA+QI FE + + +++ AV GG+++ Sbjct: 55 FKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPILQALMDKPQSFFGLVLAPTRELAFQISQSFEALGSTI-NVRCAVIVGGMDM 161 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |