CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DBP8_PICGU (ATP-dependent RNA helicase DBP8 OS=Pichia guilliermondii GN=DBP8 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.841e-11 Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 579 F+D + LL A+ P+ +Q ECIPQ + G D I AK+G GKT F + + +P + LVL TRELA QI +F + +IKVAV GG Sbjct: 3 FKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMTKWSEDPFGIYGLVLTPTRELALQIAEQFLALGASM-NIKVAVVVGG 106
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RRP3_MAGGR (ATP-dependent rRNA helicase RRP3 OS=Magnaporthe grisea GN=RRP3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 223 EAAKKGYVGIHSS------GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 EA K+G + S FRD + L A F+ P+ +Q + IP A+ G DVI A++G GKTA F L LQ P + LVL TRELA QI FE + ++ AV GG+++ Sbjct: 92 EATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASI-SLRCAVVVGGLDM 218
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RHLB_PECCP (ATP-dependent RNA helicase rhlB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ-------QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 615 F DF L P+++ A+ GF + + +Q +P A+ G DV QA++G GKT F+ ST E Q AL++ TRELA QI + E S +L +K+ + YGG +L+N Sbjct: 11 FSDFALHPQVIEALESKGFHNCTPIQALALPLALSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALS-HLTGLKLGLAYGGDGYDKQLKVLEN 133
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 46/125 (36.80%), Postives = 58/125 (46.40%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIK--VAVFYGGVNIKIHKDLLKNECPPIV 633 F D L LLR I GFE PS +Q I G D+I QA+SG GKT F + LQ+ + + LVL TRELA Q R +L + F GG ++ DL K + IV Sbjct: 28 FDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGT--RVQDDLRKLQAGVIV 150
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 46/125 (36.80%), Postives = 58/125 (46.40%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIK--VAVFYGGVNIKIHKDLLKNECPPIV 633 F D L LLR I GFE PS +Q I G D+I QA+SG GKT F + LQ+ + + LVL TRELA Q R +L + F GG ++ DL K + IV Sbjct: 28 FDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGT--RVQDDLRKLQAGVIV 150
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 43/107 (40.19%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 585 F D L +LLR + GF PS +Q I I G DV+ QA+SG GKT F ++ LQ+ +P AL+L TRELA QI ++ DIKV GG + Sbjct: 25 FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHM-DIKVHACIGGTS 130
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 184 AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 A+ + A + + KKG + S F++ L +LR + GF P+ +Q + IP +++G DV+ A +G GKTA FV+ L++ P +V ++L TRELA Q CH DIK + GG+++K+ + L+ Sbjct: 272 AKMKEFFAPEEENQPKKKGEM----SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQ-CHAVAVKLASHTDIKFCLAVGGLSLKVQEAELR 412
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 41/122 (33.61%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 ++ F+ L +LR + GF P+ +Q + IP A++G DV+ A +G GKTA FV+ L++ P +V ++L TRELA Q CH DIK + GG+++K+ + L+ Sbjct: 254 NASFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQ-CHAVATKLASHTDIKFCLAVGGLSLKVQESELR 374
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 259 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 S F+ L +LR + GF P+ +Q + IP A++G DV+ A +G GKTA FV+ L++ P +V +VL TRELA Q CH DIK + GG+++K+ + L+ Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQ-CHSVATKLASHTDIKFCLAVGGLSLKVQEGELR 395
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DDX42_DICDI (Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum GN=ddx42 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 292 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP------GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 LL+AI E P+ +Q + IP A+ G D+I AK+G GKTA F+ ++ P G + AL L TRELA+QI E ++S Y +K V YGGV+ + LK C IV Sbjct: 316 LLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPI-ALFLAPTRELAHQIYLETLKYSKYF-KLKTTVLYGGVSKQQQCKELKAGCEIIV 433 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |