CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 259 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 510 + F + +K +LLR + GFE PS +Q + I G DVI QA+SG GKT++ L+ Q + +V AL+L TRELA Q Sbjct: 18 ASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQ 101
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 +S F+ L ++R + GF P+ +Q + IP A++G DV+ A++G GKT F+L L++ P ++ +VL TRELA Q CH DIK + GG+++K + LK Sbjct: 255 ASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQ-CHAVATKLAAFTDIKFTLAVGGLSLKAQELELK 375
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_BOTFB (ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) GN=drs1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 F+ L +LR + GF P+ +Q + IP A+LG DV+ A +G GKTA FV+ L++ P +V +L TRELA Q CH DIK + GG+++K+ + L+ Sbjct: 270 FQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVLERLLYRPKKVPTSRVAILMPTRELAIQ-CHAVATKLASHTDIKFCLAVGGLSLKVQEAELR 387
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DDX49_DICDI (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum GN=ddx49 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 316 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 GF+ PS +Q IP+ + G D+I AK+G GKTA F + L Q +P V A++L TRELA QI +F + ++ +V GG++ + + L+ ++ P I+ Sbjct: 23 GFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPM-NVNCSVVIGGID-NVTQALILDKRPHII 126
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DDX20_DANRE (Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio GN=ddx20 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 43/116 (37.07%), Postives = 55/116 (47.41%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 612 F LL +L + SGF+ PS +Q + IP G+D+I QAKSG GKT VF L LVL TRE+A QI + + ++ VF GG I K LK Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLK 143
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RHLB_PSEPK (ATP-dependent RNA helicase rhlB OS=Pseudomonas putida (strain KT2440) GN=rhlB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-------GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI-KIHKDLLKNECPPIV 633 F DF L EL+ AI D GF + + +Q + + + G D I +A++G GKTA F++S + Q + P G+ AL++ TREL QI + + Y + V F GG++ K K L C +V Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMSFVGGMDFDKQLKALEARHCDILV 140
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DRS1_COCIM (ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis GN=DRS1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 +S F++F L +LR + GF P+ +Q + IP +LG D++ A +G GKTA F++ L++ P +V +L TRELA Q + + +TY DI GG +++ +++LK I+ Sbjct: 318 NSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATY-TDITFCQLVGGFSLREQENVLKQRPDVII 445
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DBP9_AJECN (ATP-dependent RNA helicase DBP9 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP9 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 250 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----STLQQTEPNPG--QVTALVLCHTRELAYQICHEFERFSTY 543 I + F L P LL+A+ F P+ +Q E IP A+ G DV+ +AK+G GKTA ++L S LQQ P ++AL+L TRELA Q+ FS + Sbjct: 21 ITAHSFETLKLDPRLLQALTQQKFTKPTPIQAEAIPLALDGKDVLARAKTGSGKTAAYLLPVLQSILQQKRNTPAHKSISALILVPTRELAEQVHRTAISFSAF 124
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DBP10_MAGGR (ATP-dependent RNA helicase DBP10 OS=Magnaporthe grisea GN=DBP10 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 235 KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV--TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 KG G S GF+ L P LL+AI GF P+ +Q + IP + DV+ A++G GKTA FV+ +++ + +V AL++ +RELA Q + F D+K + GG +++ Sbjct: 82 KGKTGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKG-TDLKTVLLVGGDSLE 201
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: SPB4_ENCCU (ATP-dependent rRNA helicase SPB4 OS=Encephalitozoon cuniculi GN=SPB4 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11 Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 262 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ----VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 618 G D + L + I ++GF +EVQ +CIP+ + G DV+ Q+ +G GKT F+ L G+ VTA+V+ TRELA QI R L D+K F GG++I+ +K E Sbjct: 5 GIEDVAMNGRLKKEIEENGFGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYDGKGRGRPGVTAVVITPTRELALQI-----REVAGLFDVKCECFIGGMSIEEDYKRMKEE 122 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |