CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18 Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 187 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 Q D ATK N F D+ LK +LL+ I + GFE PS +Q E IP A+ G D++ +AK+G GKT F + L++ +PN + A++L TRELA Q + S YL +I+V V GG +++ Sbjct: 114 QTADVTATKGNE--------------FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLR 233
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 187 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 Q D ATK N F D+ LK +LLR I + GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TRELA Q + S YL I+V V GG +++ Sbjct: 144 QTEDVTATKGNE--------------FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTSLR 263
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18 Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 193 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 P T+ A KG F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q + +L I V V GG ++ Sbjct: 31 PKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + I V GG N++ Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + I V GG N++ Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + I V GG N++ Sbjct: 38 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR 145
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 259 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 + F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q + + V GG N++ Sbjct: 31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHC-GVSCMVTTGGTNLR 140
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q H + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGL 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q H + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGL 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q H + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGL 155 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |