CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 157
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I+ GG N++ L+ E P +V Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVV 147
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 + F LKPELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ ++ GG N++ Sbjct: 24 TDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFM-SLECHACIGGTNVR 134
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DDX6_DROME (Putative ATP-dependent RNA helicase me31b OS=Drosophila melanogaster GN=me31B PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY---QICHEFERFSTYLPDIKVAVFYGGVNIK 591 F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK+G GKT + + L+Q +P + ALV+ TRELA QIC E + DI+V V GG +K Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL----DIRVMVTTGGTILK 167
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 579 F D + P +LRAI D G+E P+ +Q IP + G DV+ A++G GKTA F + L + + ALVL TRELA Q+ F R+ YL + V YGG Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGG 119
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F +F LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQQ + ++ L+L TRELA Q + +L ++ V GG ++ Sbjct: 31 FEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHL-KLQCMVTTGGTLLR 138 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |