CN188563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 67/133 (50.38%), Postives = 80/133 (60.15%), Query Frame = -3 Query: 230 PSGYSCALSSQFPPETSAVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIERE--DKNDT-WHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 619 P G +L+ + P + N RV+WKETP AHVF AD PG+ VL ISG+R E + KND WH E SSG F RRFRLP ++DQ+ ASM+NGVLTVTVPK EE +K KAI ISG Sbjct: 23 PFGAVRSLAERCP----VLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK-EETKKPQLKAIPISG 150
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24 Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = -3 Query: 230 LQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 451 LQISG+R +E+EDKNDTWHR E SSG F R FRLP+N K+DQ+KASMENGVLTVTVPK EE +K + KAIEISG Sbjct: 2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIEISG 74
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.951e-22 Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 230 AVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 568 A+ ARV+WKETPE HV D PGL VL++SG+R E E K D WHR E S G F R+FRLP+NV +D +KA +ENGVLT+T+ K+ + + + I+G Sbjct: 63 AMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAG 175
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = -3 Query: 236 NARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 559 +ARV+WKETPE HV D PGL VL++SG+R E + K D WHR E S G F R+F+LP+NV +D +KA MENGVLT+T+ K+ + + + I Sbjct: 74 HARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSI 181
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.507e-19 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = -3 Query: 233 AVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 568 A+ ARV+WKET E H D PGL VL++SG+R E E K D WHR E S G F R+F+LP+NV M+ +KA +ENGVLT+ + K+ + + + I+ Sbjct: 67 ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNIA 178
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.394e-19 Identity = 57/141 (40.43%), Postives = 77/141 (54.61%), Query Frame = -3 Query: 233 DPFRDF----PFPSGYSCALSSQFPPETSAVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 643 +PF D F + S A ++ P T A ++WKET AHVF AD PG+ VL+ISGQR E+K + WHR E SS F R RLP N D + A+++NGVLT+T+PK + RK +A+ I I+ Sbjct: 42 EPFMDAISLTAFAAAPSAAAAAAGVPST-----ASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK-DNDRKPHARIIPIT 176
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.443e-16 Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = -3 Query: 230 DPFR---DFPF-PSGYSCALSSQFPPETSAVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXV-LQISGQR---GIEREDKNDT----WHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 643 DPFR P P+G A ++ P +AV AR +WKETPEAHV D PG+ L++SG+R G E++ + WHR E ++G F RRFR+P + ++ A +++GVLTVTVPKV R + + I G Sbjct: 41 DPFRVLEQSPLRPAGGVAAAAAAGEP--AAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDG 188
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = -3 Query: 275 DPFRDFPFPSGYSCALSSQFPPETSAVVNARVEWKETPEAHVFKADFP-GLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKV 643 +PF F G + A + +TSA N +E +ET EA+VF+AD P G+ VL I+G+R + RE+K H E S F RF LP++ +D ++ASM+ G+LTVTVPKV Sbjct: 16 NPFSIF----GTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPKV 135
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = -3 Query: 275 ARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRG----IEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKV 556 ARV+W+ET +AH D PG+ VL+ISG+R E++ D WHR E S G F R+ RLP+N +D I AS++NGVLTV K+ Sbjct: 76 ARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKL 173
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = -3 Query: 233 ARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWH--RWECSSG---MFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 556 A ++W E+ +H+FK + PG VL I G+ E + +N WH E SG F RR LPENVK+DQ+KA +ENGVLTV VPK ++ + + + I+ Sbjct: 22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134 The following BLAST results are available for this feature:
BLAST of CN188563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188563 ID=CN188563; Name=CN188563; organism=Citrus sinensis; type=EST; length=645bpback to top |