CN188563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12 Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = -3 Query: 233 FPPE-TSAVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISG-------QRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 586 FPP+ SA A ++W ETP +HV + + PGL VL + G ++ ERE K+ WH E F+R LP V+++QI+AS++NGVLTV VPK + + I +S Sbjct: 19 FPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12 Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = -3 Query: 263 EWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEAR 547 E +ET EA++FKAD PG+ + +SG+R E+ ++++ ++ +E + G FSR F LPE V D ++A ++NGVLT+T+PK E + Sbjct: 57 EVRETKEAYIFKADLPGVDEKDIEVTLTGDR-VSVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPKRPEVQ 150
BLAST of CN188563 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11 Identity = 44/122 (36.07%), Postives = 58/122 (47.54%), Query Frame = -3 Query: 236 ALSSQFPPETSAVVNARVEWKETPEAHVFKADFPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWECSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 601 A S + + A+ + KE P ++VF D PGL VL ISG+R E E + + R E G F R+F LPEN D I A ++GVLTVTV K+ K IE+ Sbjct: 31 APSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEV 152 The following BLAST results are available for this feature:
BLAST of CN188563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188563 ID=CN188563; Name=CN188563; organism=Citrus sinensis; type=EST; length=645bpback to top |